Juan R. Perilla

Publication Activity (10 Years)

Years Active: 2011-2022
Publications (10 Years): 4

Top Topics

High Frequencies

Solvent Accessibility

Electron Microscopy

Molecular Dynamics

Top Venues

PLoS Comput. Biol.

J. Chem. Inf. Model.

Comput. Sci. Eng.

Publications

Alexander J. Bryer, Tyler Reddy, Edward Lyman, Juan R. Perilla
Full scale structural, mechanical and dynamical properties of HIV-1 liposomes. PLoS Comput. Biol. 18 (1) (2022)
Fabio González-Arias, Tyler Reddy, John E. Stone, Jodi A. Hadden-Perilla, Juan R. Perilla
Scalable Analysis of Authentic Viral Envelopes on FRONTERA. Comput. Sci. Eng. 22 (6) (2020)
Eric Wright, Mauricio H. Ferrato, Alexander J. Bryer, Robert Searles, Juan R. Perilla, Sunita Chandrasekaran
Accelerating prediction of chemical shift of protein structures on GPUs: Using OpenACC. PLoS Comput. Biol. 16 (5) (2020)
Alexander J. Bryer, Jodi A. Hadden-Perilla, John E. Stone, Juan R. Perilla
High-Performance Analysis of Biomolecular Containers to Measure Small-Molecule Transport, Transbilayer Lipid Diffusion, and Protein Cavities. J. Chem. Inf. Model. 59 (10) (2019)
Anna Korzeniewska, Mackenzie Carpenter Cervenka, Christophe C. Jouny, Juan R. Perilla, Jaroslaw Harezlak, Gregory K. Bergey, Piotr J. Franaszczuk, Nathan E. Crone
Ictal propagation of high frequency activity is recapitulated in interictal recordings: Effective connectivity of epileptogenic networks recorded with intracranial EEG. NeuroImage 101 (2014)
Gongpu Zhao, Juan R. Perilla, Ernest L. Yufenyuy, Xin Meng, Bo Chen, Jiying Ning, Jin-Woo Ahn, Angela M. Gronenborn, Klaus Schulten, Christopher Aiken, Peijun Zhang
Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics. Nat. 497 (7451) (2013)
Juan R. Perilla, Oliver Beckstein, Elizabeth J. Denning, Thomas B. Woolf
Computing ensembles of transitions from stable states: Dynamic importance sampling. J. Comput. Chem. 32 (2) (2011)