John T. Prince

Publication Activity (10 Years)

Years Active: 2006-2015
Publications (10 Years): 0

Top Topics

Feature Detection

Machine Learning

Mass Spectrometry

Top Venues

Briefings Bioinform.

J. Cheminformatics

Publications

Robert Smith, John T. Prince
JAMSS: proteomics mass spectrometry simulation in Java. Bioinform. 31 (5) (2015)
Robert Smith, John T. Prince, Dan Ventura
A coherent mathematical characterization of isotope trace extraction, isotopic envelope extraction, and LC-MS correspondence. BMC Bioinform. 16 (S-7) (2015)
Robert Smith, Dan Ventura, John T. Prince
LC-MS alignment in theory and practice: a comprehensive algorithmic review. Briefings Bioinform. 16 (1) (2015)
Ryan M. Taylor, Ryan H. Miller, Ryan D. Miller, Michael Porter, James Dalgleish, John T. Prince
Automated structural classification of lipids by machine learning. Bioinform. 31 (5) (2015)
Robert Smith, Ryan M. Taylor, John T. Prince
Current controlled vocabularies are insufficient to uniquely map molecular entities to mass spectrometry signal. BMC Bioinform. 16 (S-7) (2015)
Christopher J. Conley, Robert Smith, Ralf J. O. Torgrip, Ryan M. Taylor, Ralf Tautenhahn, John T. Prince
Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection. Bioinform. 30 (18) (2014)
Robert Smith, Andrew D. Mathis, Dan Ventura, John T. Prince
Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view. BMC Bioinform. 15 (S-7) (2014)
Robert Smith, Dan Ventura, John T. Prince
Controlling for confounding variables in MS-omics protocol: why modularity matters. Briefings Bioinform. 15 (5) (2014)
Robert Smith, Ryan Williamson, Dan Ventura, John T. Prince
Rubabel: Wrapping OpenBabel with Ruby. J. Cheminformatics 5 (2013)
Robert Smith, Dan Ventura, John T. Prince
Novel algorithms and the benefits of comparative validation. Bioinform. 29 (12) (2013)
Ryan M. Taylor, Jamison Dance, Russ J. Taylor, John T. Prince
Metriculator: quality assessment for mass spectrometry-based proteomics. Bioinform. 29 (22) (2013)
Robert Smith, Tamil S. Anthonymuthu, Dan Ventura, John T. Prince
Statistical agglomeration: peak summarization for direct infusion lipidomics. Bioinform. 29 (19) (2013)
Smriti R. Ramakrishnan, Christine Vogel, John T. Prince, Rong Wang, Zhihua Li, Luiz O. F. Penalva, Margaret Myers, Edward M. Marcotte, Daniel P. Miranker
Integrating shotgun proteomics and mRNA expression data to improve protein identification. Bioinform. 25 (11) (2009)
John T. Prince, Edward M. Marcotte
mspire: mass spectrometry proteomics in Ruby. Bioinform. 24 (23) (2008)
Smriti R. Ramakrishnan, Rui Mao, Aleksey A. Nakorchevskiy, John T. Prince, Willard S. Willard, Weijia Xu, Edward M. Marcotte, Daniel P. Miranker
A fast coarse filtering method for peptide identification by mass spectrometry. Bioinform. 22 (12) (2006)