Johan Trygg

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 13

Top Topics

Microscopic Images

Spatial Constraints

Top Venues

Publications

Nabeel Khalid, Maria Caroprese, Gillian Lovell, Daniel A. Porto, Johan Trygg, Andreas Dengel, Sheraz Ahmed
Bounding Box Is All You Need: Learning to Segment Cells in 2D Microscopic Images via Box Annotations. MIUA (1) (2024)
Nabeel Khalid, Mohammadmahdi Koochali, Duway Nicolas Lesmes Leon, Maria Caroprese, Gillian Lovell, Daniel A. Porto, Johan Trygg, Andreas Dengel, Sheraz Ahmed
CellGenie: An End-to-End Pipeline for Synthetic Cellular Data Generation and Segmentation: A Use Case for Cell Segmentation in Microscopic Images. MIUA (1) (2024)
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Johan Trygg, Andreas Dengel, Sheraz Ahmed
Deep Learning Architectures for the Prediction of YY1-Mediated Chromatin Loops. ISBRA (2023)
Nabeel Khalid, Mohammadmahdi Koochali, Vikas Rajashekar, Mohsin Munir, Christoffer Edlund, Timothy R. Jackson, Johan Trygg, Rickard Sjögren, Andreas Dengel, Sheraz Ahmed
DeepMuCS: A Framework for Co-culture Microscopic Image Analysis: From Generation to Segmentation. BHI (2022)
Nabeel Khalid, Fabian Schmeisser, Mohammadmahdi Koochali, Mohsin Munir, Christoffer Edlund, Timothy R. Jackson, Johan Trygg, Rickard Sjögren, Andreas Dengel, Sheraz Ahmed
Point2Mask: A Weakly Supervised Approach for Cell Segmentation Using Point Annotation. MIUA (2022)
Dong Wang, Therese Enlund, Johan Trygg, Mats Tysklind, Lili Jiang
Toward Delicate Anomaly Detection of Energy Consumption for Buildings: Enhance the Performance From Two Levels. IEEE Access 10 (2022)
Muhammad Nabeel Asim, Muhammad Imran Malik, Christoph Zehe, Johan Trygg, Andreas Dengel, Sheraz Ahmed
A Robust and Precise ConvNet for Small Non-Coding RNA Classification (RPC-snRC). IEEE Access 9 (2021)
Nabeel Khalid, Mohsin Munir, Christoffer Edlund, Timothy R. Jackson, Johan Trygg, Rickard Sjögren, Andreas Dengel, Sheraz Ahmed
DeepCeNS: An end-to-end Pipeline for Cell and Nucleus Segmentation in Microscopic Images. IJCNN (2021)
Nabeel Khalid, Mohsin Munir, Christoffer Edlund, Timothy R. Jackson, Johan Trygg, Rickard Sjögren, Andreas Dengel, Sheraz Ahmed
DeepCIS: An end-to-end Pipeline for Cell-type aware Instance Segmentation in Microscopic Images. BHI (2021)
Beatriz Galindo-Prieto, Paul Geladi, Johan Trygg
Multiblock variable influence on orthogonal projections (MB-VIOP) for enhanced interpretation of total, global, local and unique variations in OnPLS models. BMC Bioinform. 22 (1) (2021)
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Christoph Zehe, Olivier Cloarec, Rickard Sjögren, Johan Trygg, Andreas Dengel, Sheraz Ahmed
L2S-MirLoc: A Lightweight Two Stage MiRNA Sub-Cellular Localization Prediction Framework. IJCNN (2021)
Rickard Sjögren, Johan Trygg
Out-of-Distribution Example Detection in Deep Neural Networks using Distance to Modelled Embedding. CoRR (2021)
Daniel Svensson, Rickard Sjögren, David Sundell, Andreas Sjödin, Johan Trygg
doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows. BMC Bioinform. 20 (1) (2019)
Tommy Löfstedt, Olof Ahnlund, Michael Peolsson, Johan Trygg
Dynamic ultrasound imaging - A multivariate approach for the analysis and comparison of time-dependent musculoskeletal movements. BMC Medical Imaging 12 (2012)
Michael Peolsson, Tommy Löfstedt, Susanna Vogt, Hans Stenlund, Anton Arndt, Johan Trygg
Modelling human musculoskeletal functional movements using ultrasound imaging. BMC Medical Imaging 10 (2010)
Max Bylesjö, Mattias Rantalainen, Jeremy K. Nicholson, Elaine Holmes, Johan Trygg
K-OPLS package: Kernel-based orthogonal projections to latent structures for prediction and interpretation in feature space. BMC Bioinform. 9 (2008)
Mattias Rantalainen, Olivier Cloarec, Timothy M. D. Ebbels, Torbjörn Lundstedt, Jeremy K. Nicholson, Elaine Holmes, Johan Trygg
Piecewise multivariate modelling of sequential metabolic profiling data. BMC Bioinform. 9 (2008)
Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Stefan Jansson, Thomas Moritz, Johan Trygg
Orthogonal projections to latent structures as a strategy for microarray data normalization. BMC Bioinform. 8 (2007)
Max Bylesjö, Andreas Sjödin, Daniel Eriksson, Henrik Antti, Thomas Moritz, Stefan Jansson, Johan Trygg
MASQOT-GUI: spot quality assessment for the two-channel microarray platform. Bioinform. 22 (20) (2006)
Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Michael Sjöström, Stefan Jansson, Henrik Antti, Johan Trygg
MASQOT: a method for cDNA microarray spot quality control. BMC Bioinform. 6 (2005)