Jiahua He

ORCID

Publication Activity (10 Years)

Years Active: 2006-2021
Publications (10 Years): 6

Top Venues

Bioinform.

Briefings Bioinform.

Nucleic Acids Res.

University of California, San Diego, USA (PHD)

Education History

University of California, San Diego, USA

PHD

Publications

Jiahua He, Sheng-You Huang
EMNUSS: a deep learning framework for secondary structure annotation in cryo-EM maps. Briefings Bioinform. 22 (6) (2021)
Jiahua He, Sheng-You Huang
Full-length de novo protein structure determination from cryo-EM maps using deep learning. Bioinform. 37 (20) (2021)
Zeyu Wen, Jiahua He, Sheng-You Huang
Topology-independent and global protein structure alignment through an FFT-based algorithm. Bioinform. 36 (2) (2020)
Jiahua He, Huanyu Tao, Sheng-You Huang
Protein-ensemble-RNA docking by efficient consideration of protein flexibility through homology models. Bioinform. 35 (23) (2019)
Jiahua He, Jun Wang, Huanyu Tao, Yi Xiao, Sheng-You Huang
HNADOCK: a nucleic acid docking server for modeling RNA/DNA-RNA/DNA 3D complex structures. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Zeyu Wen, Jiahua He, Huanyu Tao, Sheng-You Huang
PepBDB: a comprehensive structural database of biological peptide-protein interactions. Bioinform. 35 (1) (2019)
Jiahua He, Allan Snavely, Rob F. Van der Wijngaart, Michael A. Frumkin
Automatic Recognition of Performance Idioms in Scientific Applications. IPDPS (2011)
Jiahua He, Arun Jagatheesan, Sandeep K. S. Gupta, Jeffrey Bennett, Allan Snavely
DASH: a Recipe for a Flash-based Data Intensive Supercomputer. SC (2010)
Jiahua He, Jeffrey Bennett, Allan Snavely
DASH-IO: an empirical study of flash-based IO for HPC. TG (2010)
Adrian M. Caulfield, Joel Coburn, Todor I. Mollov, Arup De, Ameen Akel, Jiahua He, Arun Jagatheesan, Rajesh K. Gupta, Allan Snavely, Steven Swanson
Understanding the Impact of Emerging Non-Volatile Memories on High-Performance, IO-Intensive Computing. SC (2010)
Jiahua He, Allan Snavely, Rob F. Van der Wijngaart, Michael A. Frumkin
Code coverage, performance approximation and automatic recognition of idioms in scientific applications. HPDC (2008)
Omid Khalili, Jiahua He, Catherine Olschanowsky, Allan Snavely, Henri Casanova
Measuring the Performance and Reliability of Production Computational Grids. GRID (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Jiahua He