James H. Leebens-Mack

Publication Activity (10 Years)

Years Active: 2004-2021
Publications (10 Years): 4

Top Topics

Comparative Genomics

Expression Profiles

Top Venues

J. Comput. Biol.

J. Bioinform. Comput. Biol.

Publications

Qiaoji Xu, Lingling Jin, James H. Leebens-Mack, David Sankoff
Validation of Automated Chromosome Recovery in the Reconstruction of Ancestral Gene Order. Algorithms 14 (6) (2021)
Qiaoji Xu, Xiaomeng Zhang, Yue Zhang, Chunfang Zheng, James H. Leebens-Mack, Lingling Jin, David Sankoff
The monoploid chromosome complement of reconstructed ancestral genomes in a phylogeny. J. Bioinform. Comput. Biol. 19 (6) (2021)
Qiaoji Xu, Lingling Jin, Yue Zhang, Xiaomeng Zhang, Chunfang Zheng, James H. Leebens-Mack, David Sankoff
Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences. J. Comput. Biol. 28 (11) (2021)
Qiaoji Xu, Lingling Jin, Chunfang Zheng, James H. Leebens-Mack, David Sankoff
RACCROCHE: Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-occurrences. ICCABS (2020)
Li-San Wang, James H. Leebens-Mack, P. Kerr Wall, Kevin Beckmann, Claude W. dePamphilis, Tandy J. Warnow
The Impact of Multiple Protein Sequence Alignment on Phylogenetic Estimation. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (4) (2011)
Ujwal R. Bagal, James H. Leebens-Mack, W. Walter Lorenz, Jeffrey F. D. Dean
Phylogenomic Analysis of the Phenylalanine Ammonia Lyase Gene Family in Loblolly Pine (Pinus Taeda L.). BIBM (2011)
Chunfang Zheng, P. Kerr Wall, James H. Leebens-Mack, Claude de Pamphilis, Victor A. Albert, David Sankoff
Gene Loss under Neighborhood Selection Following Whole genome Duplication and the Reconstruction of the Ancestral Populus genome. J. Bioinform. Comput. Biol. 7 (3) (2009)
David Sankoff, Chunfang Zheng, P. Kerr Wall, Claude de Pamphilis, James H. Leebens-Mack, Victor A. Albert
Towards Improved Reconstruction of Ancestral Gene Order in Angiosperm Phylogeny. J. Comput. Biol. 16 (10) (2009)
David Sankoff, Chunfang Zheng, P. Kerr Wall, Claude W. dePamphilis, James H. Leebens-Mack, Victor A. Albert
Internal Validation of Ancestral Gene Order Reconstruction in Angiosperm Phylogeny. RECOMB-CG (2008)
P. Kerr Wall, James H. Leebens-Mack, Kai F. Müller, Dawn Field, Naomi S. Altman, Claude W. dePamphilis
PlantTribes: a gene and gene family resource for comparative genomics in plants. Nucleic Acids Res. 36 (Database-Issue) (2008)
Liying Cui, Narayanan Veeraraghavan, Alexander Richter, P. Kerr Wall, Robert K. Jansen, James H. Leebens-Mack, Izabela Makalowska, Claude W. dePamphilis
ChloroplastDB: the Chloroplast Genome Database. Nucleic Acids Res. 34 (Database-Issue) (2006)
Ji-Ping Z. Wang, Bruce G. Lindsay, James H. Leebens-Mack, Liying Cui, P. Kerr Wall, Webb Colby Miller, Claude W. dePamphilis
EST clustering error evaluation and correction. Bioinform. 20 (17) (2004)