Jürgen Pleiss

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 8

Top Topics

Data Acquisition

Molecular Dynamics

Top Venues

Datenbank-Spektrum

Comput. Graph. Forum

J. Chem. Inf. Model.

Publications

Felix Neubauer, Paul Bredl, Minye Xu, Keyuriben Patel, Jürgen Pleiss, Benjamin Uekermann
MetaConfigurator: A User-Friendly Tool for Editing Structured Data Files. Datenbank-Spektrum 24 (2) (2024)
Bernd Flemisch, Sibylle Hermann, Melanie Herschel, Dirk Pflüger, Jürgen Pleiss, Jan Range, Sarbani Roy, Makoto Takamoto, Benjamin Uekermann
Research Data Management in Simulation Science: Infrastructure, Tools, and Applications. Datenbank-Spektrum 24 (2) (2024)
Alexander S. Behr, Elnaz Abbaspour, Katrin Rosenthal, Jürgen Pleiss, Norbert Kockmann
Ontology-Based Laboratory Data Acquisition With EnzymeML for Process Simulation of Biocatalytic Reactors. CoRDI (2023)
Karsten Schatz, Florian Frieß, Marco Schäfer, Patrick C. F. Buchholz, Jürgen Pleiss, Thomas Ertl, Michael Krone
Analyzing the similarity of protein domains by clustering Molecular Surface Maps. Comput. Graph. 99 (2021)
Karsten Schatz, Juan José Franco-Moreno, Marco Schäfer, Alexander S. Rose, Valerio Ferrario, Jürgen Pleiss, Pere-Pau Vázquez, Thomas Ertl, Michael Krone
Visual Analysis of Large-Scale Protein-Ligand Interaction Data. Comput. Graph. Forum 40 (6) (2021)
Gudrun Gygli, Jürgen Pleiss
Simulation Foundry: Automated and F.A.I.R. Molecular Modeling. J. Chem. Inf. Model. 60 (4) (2020)
Karsten Schatz, Michael Krone, Tabea L. Bauer, Valerio Ferrario, Jürgen Pleiss, Thomas Ertl
Molecular Sombreros: Abstract Visualization of Binding Sites within Proteins. VCBM (2019)
Michael Krone, Florian Friess, Katrin Scharnowski, Guido Reina, Silvia Fademrecht, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl
Molecular Surface Maps. IEEE Trans. Vis. Comput. Graph. 23 (1) (2017)
Katrin Scharnowski, Michael Krone, Guido Reina, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl
Comparative Visualization of Molecular Surfaces Using Deformable Models. Comput. Graph. Forum 33 (3) (2014)
Michael Krone, Guido Reina, Christoph Schulz, Tobias Kulschewski, Jürgen Pleiss, Thomas Ertl
Interactive Extraction and Tracking of Biomolecular Surface Features. Comput. Graph. Forum 32 (3) (2013)
Christian C. Gruber, Jürgen Pleiss
Systematic benchmarking of large molecular dynamics simulations employing GROMACS on massive multiprocessing facilities. J. Comput. Chem. 32 (4) (2011)
Michael Krone, Martin Falk, S. Rehm, Jürgen Pleiss, Thomas Ertl
Interactive Exploration of Protein Cavities. Comput. Graph. Forum 30 (3) (2011)
Demet Sirim, Florian Wagner, Lei Wang, Rolf D. Schmid, Jürgen Pleiss
The Laccase Engineering Database: a classification and analysis system for laccases and related multicopper oxidases. Database J. Biol. Databases Curation 2011 (2011)
Michael Knoll, Thomas M. Hamm, Florian Wagner, Virginia Martinez, Jürgen Pleiss
The PHA Depolymerase Engineering Database: A systematic analysis tool for the diverse family of polyhydroxyalkanoate (PHA) depolymerases. BMC Bioinform. 10 (2009)
Katrin Bidmon, Sebastian Grottel, Fabian Bös, Jürgen Pleiss, Thomas Ertl
Visual Abstractions of Solvent Pathlines near Protein Cavities. Comput. Graph. Forum 27 (3) (2008)
Katrin Bidmon, Guido Reina, Fabian Bös, Jürgen Pleiss, Thomas Ertl
Time-Based Haptic Analysis of Protein Dynamics. WHC (2007)
Markus Fischer, Michael Knoll, Demet Sirim, Florian Wagner, Sonja Funke, Jürgen Pleiss
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family. Bioinform. 23 (15) (2007)
Markus Fischer, Quan K. Thai, Melanie Grieb, Jürgen Pleiss
DWARF - a data warehouse system for analyzing protein families. BMC Bioinform. 7 (2006)
Natalia Currle-Linde, Panagiotis A. Adamidis, Michael M. Resch, Fabian Bös, Jürgen Pleiss
GriCoL: A Language for Scientific Grids. e-Science (2006)
Alexander Seifert, Michael Krahn, Stephan Tatzel, Rolf D. Schmid, Jürgen Pleiss
A Model of Specificity and Selectivity of Mammalian Cytochrome P450 Monooxy-genases. German Conference on Bioinformatics (2005)
Fabian Bös, Natalia Currle-Linde, Peggy Lindner, Rolf D. Schmid, Jürgen Pleiss
High-throughput molecular dynamics simulations: Long and short range effects of mutations on substrate specificity. German Conference on Bioinformatics (2004)
Sandra Barth, Markus Fischer, Rolf D. Schmid, Jürgen Pleiss
The database of epoxide hydrolases and haloalkane dehalogenases: one structure, many functions. Bioinform. 20 (16) (2004)
Markus Fischer, Jürgen Pleiss
The Lipase Engineering Database: a navigation and analysis tool for protein families. Nucleic Acids Res. 31 (1) (2003)
Jürgen Pleiss, Christian Gentner, Holger Scheib, Tanja Schulz, Rolf D. Schmid
From sequence to function: a quantitative model of lipase enantioselectivity. German Conference on Bioinformatics (2001)
Markus Fischer, Tanja Schulz, Jürgen Pleiss, Rolf D. Schmid
Understanding the sequence-structure-function relationship of lipases. German Conference on Bioinformatics (1999)
Robert C. Drees, Jürgen Pleiss, Rolf D. Schmid, Dieter Roller
Integrating Molecular Modeling Tools and Virtual Reality Engines: An Architecture for a Highly Immersive Molecular Modeling (HIMM) Environment. Computer Graphics International (1998)
Markus Fischer, Christoph Kaiser, Jürgen Pleiss, Rolf D. Schmid
Lipase Engineering Database. German Conference on Bioinformatics (1998)
Robert C. Drees, Jürgen Pleiss, Rolf D. Schmid
Highly Immersive Molecular Modeling (HIMM): An Architecture for the Integration of Molecular Modeling and Virtual Reality. German Conference on Bioinformatics (1996)