Igor V. Pivkin

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 5

Top Topics

Gene Regulatory Networks

Methodological Framework

Boundary Conditions

Top Venues

PLoS Comput. Biol.

Publications

Pietro Miotti, Edoardo Filippi-Mazzola, Ernst C. Wit, Igor V. Pivkin
Estimating Parameters of 3D Cell Model Using a Bayesian Recursive Global Optimizer (BaRGO). ICCS (3) (2023)
Antoine Buetti-Dinh, Malte Herold, Stephan Christel, Mohamed El Hajjami, Francesco Delogu, Olga Ilie, Sören Bellenberg, Paul Wilmes, Ansgar Poetsch, Wolfgang Sand, Mario Vera, Igor V. Pivkin, Ran Friedman, Mark Dopson
Reverse engineering directed gene regulatory networks from transcriptomics and proteomics data of biomining bacterial communities with approximate Bayesian computation and steady-state signalling simulations. BMC Bioinform. 21 (1) (2020)
Kirill Lykov, Yasaman Nematbakhsh, Menglin Shang, Chwee Teck Lim, Igor V. Pivkin
Probing eukaryotic cell mechanics via mesoscopic simulations. PLoS Comput. Biol. 13 (9) (2017)
Alessandro Margara, Mauro Pezzè, Igor V. Pivkin, Mauro Santoro
Towards an Engineering Methodology for Multi-model Scientific Simulations. SE4HPCS@ICSE (2015)
Kirill Lykov, Xuejin Li, Huan Lei, Igor V. Pivkin, George E. Karniadakis
Inflow/Outflow Boundary Conditions for Particle-Based Blood Flow Simulations: Application to Arterial Bifurcations and Trees. PLoS Comput. Biol. 11 (8) (2015)