Ian P. Barrett

Publication Activity (10 Years)

Years Active: 2016-2022
Publications (10 Years): 11

Top Topics

Learned Knowledge

Chemical Compounds

Data Mining Tools

Top Venues

Briefings Bioinform.

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Stephen Bonner, Ufuk Kirik, Ola Engkvist, Jian Tang, Ian P. Barrett
Implications of topological imbalance for representation learning on biomedical knowledge graphs. Briefings Bioinform. 23 (5) (2022)
Cheng Ye, Rowan Swiers, Stephen Bonner, Ian P. Barrett
A Knowledge Graph-Enhanced Tensor Factorisation Model for Discovering Drug Targets. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (6) (2022)
Stephen Bonner, Ian P. Barrett, Cheng Ye, Rowan Swiers, Ola Engkvist, Andreas Bender, Charles Tapley Hoyt, William L. Hamilton
A review of biomedical datasets relating to drug discovery: a knowledge graph perspective. Briefings Bioinform. 23 (6) (2022)
Stephen Bonner, Ian P. Barrett, Cheng Ye, Rowan Swiers, Ola Engkvist, William L. Hamilton
Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery. CoRR (2021)
Maria-Anna Trapotsi, Lewis H. Mervin, Avid M. Afzal, Noé Sturm, Ola Engkvist, Ian P. Barrett, Andreas Bender
Comparison of Chemical Structure and Cell Morphology Information for Multitask Bioactivity Predictions. J. Chem. Inf. Model. 61 (3) (2021)
Cheng Ye, Rowan Swiers, Stephen Bonner, Ian P. Barrett
Predicting Potential Drug Targets Using Tensor Factorisation and Knowledge Graph Embeddings. CoRR (2021)
Stephen Bonner, Ian P. Barrett, Cheng Ye, Rowan Swiers, Ola Engkvist, Andreas Bender, William L. Hamilton
A Review of Biomedical Datasets Relating to Drug Discovery: A Knowledge Graph Perspective. CoRR (2021)
Stephen Bonner, Ufuk Kirik, Ola Engkvist, Jian Tang, Ian P. Barrett
Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs. CoRR (2021)
Lewis H. Mervin, Maria-Anna Trapotsi, Avid M. Afzal, Ian P. Barrett, Andreas Bender, Ola Engkvist
Probabilistic Random Forest improves bioactivity predictions close to the classification threshold by taking into account experimental uncertainty. J. Cheminformatics 13 (1) (2021)
Lewis H. Mervin, Krishna C. Bulusu, Leen Kalash, Avid M. Afzal, Fredrik Svensson, Mike A. Firth, Ian P. Barrett, Ola Engkvist, Andreas Bender
Orthologue chemical space and its influence on target prediction. Bioinform. 34 (1) (2018)
Peter Rashkov, Ian P. Barrett, Robert E. Beardmore, Claus Bendtsen, Ivana Gudelj
Kinase Inhibition Leads to Hormesis in a Dual Phosphorylation-Dephosphorylation Cycle. PLoS Comput. Biol. 12 (11) (2016)