Herbert Levine

Publication Activity (10 Years)

Years Active: 2005-2022
Publications (10 Years): 8

Top Topics

Gene Regulatory

Modeling Framework

Regulatory Networks

Top Venues

PLoS Comput. Biol.

Nat. Comput. Sci.

BMC Syst. Biol.

Publications

Shubham Tripathi, Jun Hyoung Park, Shivanand Pudakalakatti, Pratip K. Bhattacharya, Benny Abraham Kaipparettu, Herbert Levine
A mechanistic modeling framework reveals the key principles underlying tumor metabolism. PLoS Comput. Biol. 18 (2) (2022)
Xingcheng Lin, Jason T. George, Nicholas P. Schafer, Kevin Ng Chau, Michael E. Birnbaum, Cecilia Clementi, José N. Onuchic, Herbert Levine
Rapid assessment of T-cell receptor specificity of the immune repertoire. Nat. Comput. Sci. 1 (5) (2021)
Mrinmoy Mukherjee, Herbert Levine
Cluster size distribution of cells disseminating from a primary tumor. PLoS Comput. Biol. 17 (11) (2021)
Vivek Kohar, Danya Gordin, Ataur Katebi, Herbert Levine, José N. Onuchic, Mingyang Lu
Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits. Bioinform. 37 (9) (2021)
Shubham Tripathi, Priyanka Chakraborty, Herbert Levine, Mohit Kumar Jolly
A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells. PLoS Comput. Biol. 16 (2) (2020)
Bin Huang, Dongya Jia, Jingchen Feng, Herbert Levine, José N. Onuchic, Mingyang Lu
RACIPE: a computational tool for modeling gene regulatory circuits using randomization. BMC Syst. Biol. 12 (1) (2018)
Bin Huang, Mingyang Lu, Dongya Jia, Eshel Ben-Jacob, Herbert Levine, José N. Onuchic
Interrogating the topological robustness of gene regulatory circuits by randomization. PLoS Comput. Biol. 13 (3) (2017)
Brian A. Camley, Juliane Zimmermann, Herbert Levine, Wouter-Jan Rappel
Collective Signal Processing in Cluster Chemotaxis: Roles of Adaptation, Amplification, and Co-attraction in Collective Guidance. PLoS Comput. Biol. 12 (7) (2016)
Inbal Hecht, Monica L. Skoge, Pascale G. Charest, Eshel Ben-Jacob, Richard A. Firtel, William F. Loomis, Herbert Levine, Wouter-Jan Rappel
Activated Membrane Patches Guide Chemotactic Cell Motility. PLoS Comput. Biol. 7 (6) (2011)
Vladislav Volman, Herbert Levine, Terrence J. Sejnowski
Shunting Inhibition Controls the Gain Modulation Mediated by Asynchronous Neurotransmitter Release in Early Development. PLoS Comput. Biol. 6 (11) (2010)
Suhita Nadkarni, Thomas M. Bartol, Terrence J. Sejnowski, Herbert Levine
Modelling Vesicular Release at Hippocampal Synapses. PLoS Comput. Biol. 6 (11) (2010)
Suhita Nadkarni, Peter Jung, Herbert Levine
Astrocytes Optimize the Synaptic Transmission of Information. PLoS Comput. Biol. 4 (5) (2008)
Vladislav Volman, Eshel Ben-Jacob, Herbert Levine
The Astrocyte as a Gatekeeper of Synaptic Information Transfer. Neural Comput. 19 (2) (2007)
Erel Levine, Peter T. McHale, Herbert Levine
Small Regulatory RNAs May Sharpen Spatial Expression Patterns. PLoS Comput. Biol. 3 (11) (2007)
Herbert Levine, Eshel Ben-Jacob, Inon Cohen, Wouter-Jan Rappel
Swarming patterns in Microorganisms: Some new modeling results. CDC (2006)
Pablo Blinder, Itay Baruchi, Vladislav Volman, Herbert Levine, Danny Baranes, Eshel Jacob
Functional Topology Classification of Biological Computing Networks. Nat. Comput. 4 (4) (2005)