Filip Stefaniak

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 6

Top Topics

Mass Spectrometry Data

Structural Information

Scoring Function

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

Briefings Bioinform.

Publications

Natalia A Szulc, Zuzanna Mackiewicz, Janusz M. Bujnicki, Filip Stefaniak
Structural interaction fingerprints and machine learning for predicting and explaining binding of small molecule ligands to RNA. Briefings Bioinform. 24 (4) (2023)
Pietro Boccaletto, Filip Stefaniak, Angana Ray, Andrea Cappannini, Sunandan Mukherjee, Elzbieta Purta, Malgorzata Kurkowska, Niloofar Shirvanizadeh, Eliana Destefanis, Paula Groza, Gülben Avsar, Antonia Romitelli, Pinar Pir, Erik Dassi, Silvestro G. Conticello, Francesc Aguiló, Janusz M. Bujnicki
MODOMICS: a database of RNA modification pathways. 2021 update. Nucleic Acids Res. 50 (D1) (2022)
Natalia Szulc, Zuzanna Mackiewicz, Janusz M. Bujnicki, Filip Stefaniak
fingeRNAt - A novel tool for high-throughput analysis of nucleic acid-ligand interactions. PLoS Comput. Biol. 18 (6) (2022)
Filip Stefaniak, Janusz M. Bujnicki
AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses. PLoS Comput. Biol. 17 (2) (2021)
Tomasz K. Wirecki, Katarzyna Merdas, Agata Bernat, Michal J. Boniecki, Janusz M. Bujnicki, Filip Stefaniak
RNAProbe: a web server for normalization and analysis of RNA structure probing data. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Pietro Boccaletto, Marcin Magnus, Catarina Almeida, Adriana Zyla, Astha Astha, Radoslaw Pluta, Blazej Baginski, Elzbieta Jankowska, Stanislaw Dunin-Horkawicz, Tomasz K. Wirecki, Michal J. Boniecki, Filip Stefaniak, Janusz M. Bujnicki
RNArchitecture: a database and a classification system of RNA families, with a focus on structural information. Nucleic Acids Res. 46 (Database-Issue) (2018)