Fenix W. D. Huang

Publication Activity (10 Years)

Years Active: 2009-2021
Publications (10 Years): 7

Top Topics

Top Venues

J. Comput. Biol.

Algorithms Mol. Biol.

Publications

Christopher L. Barrett, Andrei C. Bura, Qijun He, Fenix W. D. Huang, Thomas J. X. Li, Michael S. Waterman, Christian M. Reidys
Multiscale Feedback Loops in SARS-CoV-2 Viral Evolution. J. Comput. Biol. 28 (3) (2021)
Fenix W. D. Huang, Christopher L. Barrett, Christian M. Reidys
The energy-spectrum of bicompatible sequences. Algorithms Mol. Biol. 16 (1) (2021)
Christopher L. Barrett, Qijun He, Fenix W. D. Huang, Christian M. Reidys
A Boltzmann Sampler for 1-Pairs with Double Filtration. J. Comput. Biol. 26 (3) (2019)
Christopher L. Barrett, Qijun He, Fenix W. D. Huang, Christian M. Reidys
An Efficient Dual Sampling Algorithm with Hamming Distance Filtration. J. Comput. Biol. 25 (11) (2018)
Christopher L. Barrett, Fenix W. D. Huang, Christian M. Reidys
Sequence-structure relations of biopolymers. Bioinform. 33 (3) (2017)
Fenix W. D. Huang, Christian M. Reidys
A topological framework for signed permutations. Discret. Math. 340 (9) (2017)
Fenix W. D. Huang, Christian M. Reidys
Topological language for RNA. CoRR (2016)
Christopher L. Barrett, Fenix W. D. Huang, Christian M. Reidys
Evidence of higher order patterns in information transmission between nucleotide sequences and folded molecular shapes of RNA. BICT (2015)
Fenix W. D. Huang, Markus E. Nebel, Christian M. Reidys
Uniform generation of RNA pseudoknot structures with genus filtration CoRR (2013)
Fenix W. D. Huang, Christian M. Reidys
On the combinatorics of sparsification. Algorithms Mol. Biol. 7 (2012)
Jørgen E. Andersen, Fenix W. D. Huang, Robert C. Penner, Christian M. Reidys
Topology of RNA-RNA Interaction Structures. J. Comput. Biol. 19 (7) (2012)
Christian M. Reidys, Fenix W. D. Huang, Jørgen E. Andersen, Robert C. Penner, Peter F. Stadler, Markus E. Nebel
Addendum: topology and prediction of RNA pseudoknots. Bioinform. 28 (2) (2012)
Christian M. Reidys, Fenix W. D. Huang, Jørgen E. Andersen, Robert C. Penner, Peter F. Stadler, Markus E. Nebel
Topology and prediction of RNA pseudoknots. Bioinform. 27 (8) (2011)
Fenix W. D. Huang, Jing Qin, Christian M. Reidys, Peter F. Stadler
Target prediction and a statistical sampling algorithm for RNA-RNA interaction. Bioinform. 26 (2) (2010)
Fenix W. D. Huang, Christian M. Reidys
On the Uniform Generation of Modular Diagrams. Electron. J. Comb. 17 (1) (2010)
Fenix W. D. Huang, Jing Qin, Christian M. Reidys, Peter F. Stadler
Partition function and base pairing probabilities for RNA-RNA interaction prediction. Bioinform. 25 (20) (2009)
Fenix W. D. Huang, Linda Y. M. Li, Christian M. Reidys
Sequence-structure relations of pseudoknot RNA. BMC Bioinform. 10 (S-1) (2009)
Fenix W. D. Huang, Wade W. J. Peng, Christian M. Reidys
Folding 3-Noncrossing RNA Pseudoknot Structures. J. Comput. Biol. 16 (11) (2009)