Derrick W. Crook

Publication Activity (10 Years)

Years Active: 2013-2023
Publications (10 Years): 9

Top Topics

Human Immunodeficiency Virus

Processing Pipeline

Machine Learning

Cloud Computing

Top Venues

Briefings Bioinform.

Publications

Bede Constantinides, Martin Hunt, Derrick W. Crook
Hostile: accurate decontamination of microbial host sequences. Bioinform. 39 (12) (2023)
Yang Yang, Timothy M. Walker, Samaneh Kouchaki, Chenyang Wang, Timothy E. A Peto, Derrick W. Crook, David A. Clifton
An end-to-end heterogeneous graph attention network for Mycobacterium tuberculosis drug-resistance prediction. Briefings Bioinform. 22 (6) (2021)
Yifei Xu, Fan Yang-Turner, Denis Volk, Derrick W. Crook
NanoSPC: a scalable, portable, cloud compatible viral nanopore metagenomic data processing pipeline. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Fan Yang-Turner, Denis Volk, Philip Fowler, Jeremy Swann, Matthew Bull, Sarah Hoosdally, Thomas Connor, Tim E. A. Peto, Derrick W. Crook
): Enabling Unified Genomic Data Analysis with Elastic Cloud Computing. CLOUD (2019)
Samaneh Kouchaki, Yang Yang, Timothy M. Walker, A. Sarah Walker, Daniel J. Wilson, Timothy E. A Peto, Derrick W. Crook, CRyPTIC Consortium, David A. Clifton
Application of machine learning techniques to tuberculosis drug resistance analysis. Bioinform. 35 (13) (2019)
Yang Yang, Timothy M. Walker, A. Sarah Walker, Daniel J. Wilson, Timothy E. A Peto, Derrick W. Crook, Farah Shamout, CRyPTIC Consortium, Tingting Zhu, David A. Clifton
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis. Bioinform. 35 (18) (2019)
Fan Yang-Turner, Lawrence Gripper, Jeremy Swann, Trien Do, Dona Foster, Denis Volk, Anita Ramanan, Marcus Robinson, Tim E. A. Peto, Derrick W. Crook
An Open-Source Azure Solution for Scalable Genomics Workflows. SERVICES (2018)
Yang Yang, Katherine E. Niehaus, Timothy M. Walker, Zamin Iqbal, A. Sarah Walker, Daniel J. Wilson, Tim E. A. Peto, Derrick W. Crook, E. Grace Smith, Tingting Zhu, David A. Clifton
Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data. Bioinform. 34 (10) (2018)
Oriol Mazariegos-Canellas, Trien Do, Tim E. A. Peto, David W. Eyre, Anthony Underwood, Derrick W. Crook, David H. Wyllie
BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness. BMC Bioinform. 18 (1) (2017)
Katherine E. Niehaus, Timothy M. Walker, Derrick W. Crook, Tim E. A. Peto, David A. Clifton
Machine learning for the prediction of antibacterial susceptibility in Mycobacterium tuberculosis. BHI (2014)
David W. Eyre, Madeleine L. Cule, David Griffiths, Derrick W. Crook, Tim E. A. Peto, A. Sarah Walker, Daniel J. Wilson
Transmission. PLoS Comput. Biol. 9 (5) (2013)