David J. John

Publication Activity (10 Years)

Years Active: 1994-2020
Publications (10 Years): 4

Top Topics

Computer Science Curriculum

Parallel And Distributed Computing

Evolutionary Strategy

Top Venues

GECCO (Companion)

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Alina Pacheco Rodríguez, Errin W. Fulp, David J. John, Jinku Cui
Using evolutionary algorithms and pareto ranking to identify secure virtual local area networks. GECCO Companion (2020)
Edward E. Allen, John Farrell, Alexandria F. Harkey, David J. John, Gloria K. Muday, James L. Norris, Bo Wu
Time Series Adjustment Enhancement of Hierarchical Modeling of Arabidopsis Thaliana Gene Interactions. AlCoB (2020)
Bree Ann LaPointe, David J. John, James L. Norris, Edward E. Allen, Alexandria F. Harkey, Joelle K. Muhlemann, Gloria K. Muday
A BCHC genetic algorithm model of cotemporal hierarchical Arabidopsis thaliana gene interactions. BIBM (2018)
Errin W. Fulp, H. Donald Gage, David J. John, Matthew R. McNiece, William H. Turkett Jr., Xin Zhou
An Evolutionary Strategy for Resilient Cyber Defense. GLOBECOM (2015)
Kristopher L. Patton, David J. John, James L. Norris, Daniel R. Lewis, Gloria K. Muday
Hierarchical Probabilistic Interaction Modeling for Multiple Gene Expression Replicates. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (2) (2014)
Brian Lucas, Errin W. Fulp, David J. John, Daniel A. Cañas
An initial framework for evolving computer configurations as a moving target defense. CISR (2014)
David J. John, Robert W. Smith, William H. Turkett Jr., Daniel A. Cañas, Errin W. Fulp
Evolutionary based moving target cyber defense. GECCO (Companion) (2014)
David J. John, Stan J. Thomas
Parallel and Distributed Computing across the Computer Science Curriculum. IPDPS Workshops (2014)
Kristopher L. Patton, David J. John, James L. Norris
Bayesian probabilistic network modeling from multiple independent replicates. BMC Bioinform. 13 (S-9) (2012)
Kristopher L. Patton, David J. John, James L. Norris
Probabilistic Signal Network Models from Multiple Replicates of Sparse Time-Course Data. BIBM (2011)
David J. John, Jacquelyn S. Fetrow, James L. Norris
Continuous Cotemporal Probabilistic Modeling of Systems Biology Networks from Sparse Data. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (5) (2011)
Rachel A. Black, David J. John, Jacquelyn S. Fetrow, James L. Norris
Examining effects of variability on systems biology modeling algorithms. BCB (2010)
Edward E. Allen, James L. Norris, David J. John, Stan J. Thomas, William H. Turkett Jr., Jacquelyn S. Fetrow
Comparison of Co-temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets. BIBE (2010)
Amy L. Olex, David J. John, Elizabeth M. Hiltbold, Jacquelyn S. Fetrow
Additional limitations of the clustering validation method figure of merit. ACM Southeast Regional Conference (2007)
Edward E. Allen, Liyang Diao, Jacquelyn S. Fetrow, David J. John, Richard F. Loeser, Leslie B. Poole
The shuffle index and evaluation of models of signal transduction pathways. ACM Southeast Regional Conference (2007)
David J. John, Jacquelyn S. Fetrow, James L. Norris
Metropolis-Hastings Algorithm and Continuous Regression for finding Next-State Models of Protein Modification using Information Scores. BIBE (2007)
Edward E. Allen, Anthony Pecorella, Jacquelyn S. Fetrow, David J. John, William H. Turkett Jr.
Reconstructing networks using co-temporal functions. ACM Southeast Regional Conference (2006)
Jacquelyn S. Fetrow, David J. John
Bioinformatics and computing curriculum: a new model for interdisciplinary courses. SIGCSE (2006)
Margaret Ann Francel, David J. John
Constructing an even grammar from a 2-element sample. ACM Southeast Regional Conference (1) (2005)
Edward E. Allen, Jacquelyn S. Fetrow, David J. John, Stan J. Thomas
Heuristics for dependency conjectures in proteomic signaling pathways. ACM Southeast Regional Conference (1) (2005)
Margaret Ann Francel, David J. John
An algorithm for constructing an even grammar from a language sample. ACM Southeast Regional Conference (2004)
Margaret Ann Francel, David J. John
3-Regular Hypergraphs that are Decomposable and Threshold. Ars Comb. 67 (2003)
David J. John
Co-evolution With The Bierwirth-Mattfeld Hybrid Scheduler. GECCO (2002)
David J. John
. ACM Southeast Regional Conference (1998)
Margaret Ann Francel, David J. John
Counting Balanced Ternary Designs. Ars Comb. 49 (1998)
David J. John
NSF supported projects: parallel computation as an integrated component in the undergraduate curriculum in computer science. SIGCSE (1994)