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Daniel Jost
ORCID
Publication Activity (10 Years)
Years Active: 2013-2022
Publications (10 Years): 6
Top Topics
Cognitive Modelling
Dna Computing
Lung Cancer
Energy Landscape
Top Venues
PLoS Comput. Biol.
Bioinform.
BMC Bioinform.
Nucleic Acids Res.
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Publications
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Kapil Newar
,
Amith Zafal Abdulla
,
Hossein Salari
,
Eric Fanchon
,
Daniel Jost
Dynamical modeling of the H3K27 epigenetic landscape in mouse embryonic stem cells.
PLoS Comput. Biol.
18 (9) (2022)
Todor Gitchev
,
Gabriel Zala
,
Peter Meister
,
Daniel Jost
3DPolyS-LE: an accessible simulation framework to model the interplay between chromatin and loop extrusion.
Bioinform.
38 (24) (2022)
Polina Belokopytova
,
Emil Viesná
,
Mateusz Chilinski
,
Yifeng Qi
,
Hossein Salari
,
Marco Di Stefano
,
Andrea Esposito
,
Mattia Conte
,
Andrea Maria Chiariello
,
Vladimir B. Teif
,
Dariusz Plewczynski
,
Bin Zhang
,
Daniel Jost
,
Veniamin Fishman
3DGenBench: a web-server to benchmark computational models for 3D Genomics.
Nucleic Acids Res.
50 (W1) (2022)
Magali Richard
,
Clémentine Decamps
,
Florent Chuffart
,
Elisabeth Brambilla
,
Sophie Rousseaux
,
Saadi Khochbin
,
Daniel Jost
PenDA, a rank-based method for personalized differential analysis: Application to lung cancer.
PLoS Comput. Biol.
16 (5) (2020)
Clémentine Decamps
,
Florian Privé
,
Raphael Bacher
,
Daniel Jost
,
Arthur Waguet
,
Eugene Andres Houseman
,
Eugene Lurie
,
Pavlo Lutsik
,
Aleksandar Milosavljevic
,
Michael Scherer
,
Michael G. B. Blum
,
Magali Richard
Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software.
BMC Bioinform.
21 (1) (2020)
Surya K. Ghosh
,
Daniel Jost
How epigenome drives chromatin folding and dynamics, insights from efficient coarse-grained models of chromosomes.
PLoS Comput. Biol.
14 (5) (2018)
Daniel Jost
Twist-DNA: computing base-pair and bubble opening probabilities in genomic superhelical DNA.
Bioinform.
29 (19) (2013)