Colin Studholme

Publication Activity (10 Years)

Years Active: 1994-2020
Publications (10 Years): 8

Top Topics

Image Reconstruction

Corpus Callosum

Top Venues

Medical Image Anal.

Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging

Publications

David Hunt, Manjiri Dighe, Chris Gatenby, Colin Studholme
Automatic, Age Consistent Reconstruction of the Corpus Callosum Guided by Coherency From In Utero Diffusion-Weighted MRI. IEEE Trans. Medical Imaging 39 (3) (2020)
Zheng Liu, Xiaojie Wang, Natali Newman, Kathleen A. Grant, Colin Studholme, Christopher D. Kroenke
Anatomical and diffusion MRI brain atlases of the fetal rhesus macaque brain at 85, 110 and 135 days gestation. NeuroImage 206 (2020)
David Hunt, Manjiri Dighe, Chris Gatenby, Colin Studholme
Comparing diffusion tensor and spherical harmonic tractography for in utero studies of fetal brain connectivity. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2018)
Mengyuan Liu, Steven P. Miller, Vann Chau, Colin Studholme
Combining Spatial and Non-spatial Dictionary Learning for Automated Labeling of Intra-ventricular Hemorrhage in Neonatal Brain MRI. MICCAI (1) (2017)
Julien Pontabry, François Rousseau, Colin Studholme, Meriam Koob, Jean-Louis Dietemann
A discriminative feature selection approach for shape analysis: Application to fetal brain cortical folding. Medical Image Anal. 35 (2017)
Mengyuan Liu, Averi Kitsch, Steven P. Miller, Vann Chau, Kenneth J. Poskitt, François Rousseau, Dennis Shaw, Colin Studholme
Patch-based augmentation of Expectation-Maximization for brain MRI tissue segmentation at arbitrary age after premature birth. NeuroImage 127 (2016)
Henrique Tomaz Amaral-Silva, Luiz Otávio Murta Júnior, Paulo Mazzoncini de Azevedo Marques, Lauro Wichert-Ana, V. B. Surya Prasath, Colin Studholme
Validation of Tsallis Entropy In Inter-Modality Neuroimage Registration. CoRR (2016)
Manjiri Dighe, Yun Jung Kim, Sharmishtaa Seshamani, Anna I. Blazejewska, Susan Mckown, Jason Caucutt, J. Christopher Gatenby, Colin Studholme
Regional placental blood oxygen level dependent (BOLD) changes with gestational age in normally developing pregnancies using long duration R2* mapping in utero. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2016)
Sharmishtaa Seshamani, Anna I. Blazejewska, J. Christopher Gatenby, Susan Mckown, Jason Caucutt, Manjiri Dighe, Colin Studholme
Comparing consistency of R2* and T2*-weighted BOLD analysis of resting state fetal fMRI. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2015)
Sharmishtaa Seshamani, Anna Blazejewska, Chris Gatenby, Susan Mckown, Jason Caucutt, Manjiri Dighe, Colin Studholme
2 map estimation from motion scattered slices for fetal fMRI. ISBI (2015)
Mads Fogtmann, Sharmishtaa Seshamani, Christopher D. Kroenke, Xi Cheng, Teresa Chapman, Jakob Wilm, François Rousseau, Colin Studholme
A Unified Approach to Diffusion Direction Sensitive Slice Registration and 3-D DTI Reconstruction From Moving Fetal Brain Anatomy. IEEE Trans. Medical Imaging 33 (2) (2014)
Mengyuan Liu, Sharmishtaa Seshamani, Lisa Harrylock, Averi Kitsch, Steven P. Miller, Vann Chau, Kenneth J. Poskitt, François Rousseau, Colin Studholme
Spatially adapted augmentation of age-specific atlas-based segmentation using patch-based priors. Medical Imaging: Image Processing (2014)
Sharmishtaa Seshamani, Xi Cheng, Mads Fogtmann, Moriah E. Thomason, Colin Studholme
A Method for handling intensity inhomogenieties in fMRI sequences of moving anatomy of the early developing brain. Medical Image Anal. 18 (2) (2014)
François Rousseau, Colin Studholme
A supervised patch-based image reconstruction technique: Application to brain MRI super-resolution. ISBI (2013)
François Rousseau, Estanislao Oubel, Julien Pontabry, Marc Schweitzer, Colin Studholme, Meriam Koob, Jean-Louis Dietemann
BTK: An open-source toolkit for fetal brain MR image processing. Comput. Methods Programs Biomed. 109 (1) (2013)
Xi Cheng, Jakob Wilm, Sharmishtaa Seshamani, Mads Fogtmann, Christopher D. Kroenke, Colin Studholme
Adapting parcellation schemes to study fetal brain connectivity in serial imaging studies. EMBC (2013)
Sharmishtaa Seshamani, Mads Fogtmann, Xi Cheng, Moriah E. Thomason, Chris Gatenby, Colin Studholme
Cascaded slice to volume registration for moving fetal FMRI. ISBI (2013)
Julien Pontabry, François Rousseau, Estanislao Oubel, Colin Studholme, Meriam Koob, Jean-Louis Dietemann
Probabilistic tractography using Q-ball imaging and particle filtering: Application to adult and in-utero fetal brain studies. Medical Image Anal. 17 (3) (2013)
François Rousseau, Daniel Gounot, Colin Studholme
On high-resolution image estimation using low-resolution brain MRI. EMBC (2013)
Colin Studholme
Fetal brain mapping. ISBI (2012)
Estanislao Oubel, Meriam Koob, Colin Studholme, Jean-Louis Dietemann, François Rousseau
Reconstruction of scattered data in fetal diffusion MRI. Medical Image Anal. 16 (1) (2012)
Vidya Rajagopalan, Julia A. Scott, Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
Mapping directionality specific volume changes using tensor based morphometry: An application to the study of gyrogenesis and lateralization of the human fetal brain. NeuroImage 63 (2) (2012)
François Rousseau, Piotr A. Habas, Colin Studholme
Human brain labeling using image similarities. CVPR (2011)
François Rousseau, Piotr A. Habas, Colin Studholme
A Supervised Patch-Based Approach for Human Brain Labeling. IEEE Trans. Medical Imaging 30 (10) (2011)
Piotr A. Habas, Vidya Rajagopalan, Julia A. Scott, Kio Kim, Ahmad Roosta, François Rousseau, A. James Barkovich, Orit A. Glenn, Colin Studholme
Detection and mapping of delays in early cortical folding derived from in utero MRI. Medical Imaging: Image Processing (2011)
Vidya Rajagopalan, Julia A. Scott, Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
Spatiotemporal Morphometry of Adjacent Tissue Layers with Application to the Study of Sulcal Formation. MICCAI (2) (2011)
Kio Kim, Piotr A. Habas, Vidya Rajagopalan, Julia A. Scott, François Rousseau, A. James Barkovich, Orit A. Glenn, Colin Studholme
SLIMMER: SLIce MRI motion estimation and reconstruction tool for studies of fetal anatomy. Medical Imaging: Image Processing (2011)
Benoît Caldairou, Nicolas Passat, Piotr A. Habas, Colin Studholme, Meriam Koob, Jean-Louis Dietemann, François Rousseau
Data-Driven Cortex Segmentation in Reconstructed Fetal MRI by Using Structural Constraints. CAIP (1) (2011)
Kio Kim, Piotr A. Habas, Vidya Rajagopalan, Julia A. Scott, James M. Corbett-Detig, François Rousseau, A. James Barkovich, Orit A. Glenn, Colin Studholme
Bias Field Inconsistency Correction of Motion-Scattered Multislice MRI for Improved 3D Image Reconstruction. IEEE Trans. Medical Imaging 30 (9) (2011)
Benoît Caldairou, Nicolas Passat, Piotr A. Habas, Colin Studholme, Meriam Koob, Jean-Louis Dietemann, François Rousseau
Segmentation of the cortex in fetal MRI using a topological model. ISBI (2011)
Benoît Caldairou, Nicolas Passat, Piotr A. Habas, Colin Studholme, François Rousseau
A non-local fuzzy segmentation method: Application to brain MRI. Pattern Recognit. 44 (9) (2011)
Kio Kim, Piotr A. Habas, François Rousseau, Orit A. Glenn, A. James Barkovich, Meriam Koob, Jean-Louis Dietemann, Ashley J. Robinson, Kenneth J. Poskitt, Steven P. Miller, Colin Studholme
Reconstruction of a geometrically correct diffusion tensor image of a moving human fetal brain. Medical Imaging: Image Processing (2010)
François Rousseau, Kio Kim, Colin Studholme, Meriam Koob, Jean-Louis Dietemann
On Super-Resolution for Fetal Brain MRI. MICCAI (2) (2010)
Estanislao Oubel, Meriam Koob, Colin Studholme, Jean-Louis Dietemann, François Rousseau
Reconstruction of Scattered Data in Fetal Diffusion MRI. MICCAI (1) (2010)
Vidya Rajagopalan, Julia A. Scott, Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
Measures for Characterizing Directionality Specific Volume Changes in TBM of Brain Growth. MICCAI (2) (2010)
François Rousseau, Kio Kim, Colin Studholme
A groupwise super-resolution approach: application to brain MRI. ISBI (2010)
Kio Kim, Piotr A. Habas, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
Intersection Based Motion Correction of Multislice MRI for 3-D in Utero Fetal Brain Image Formation. IEEE Trans. Medical Imaging 29 (1) (2010)
Piotr A. Habas, Kio Kim, James M. Corbett-Detig, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
A spatiotemporal atlas of MR intensity, tissue probability and shape of the fetal brain with application to segmentation. NeuroImage 53 (2) (2010)
Piotr A. Habas, Kio Kim, Dharshan Chandramohan, François Rousseau, Orit A. Glenn, Colin Studholme
Statistical model of laminar structure for atlas-based segmentation of the fetal brain from in utero MR images. Medical Imaging: Image Processing (2009)
Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
A Spatio-temporal Atlas of the Human Fetal Brain with Application to Tissue Segmentation. MICCAI (1) (2009)
Stathis Hadjidemetriou, Colin Studholme, Susanne G. Mueller, Michael Weiner, Norbert Schuff
Restoration of MRI data for intensity non-uniformities using local high order intensity statistics. Medical Image Anal. 13 (1) (2009)
Benoît Caldairou, François Rousseau, Nicolas Passat, Piotr A. Habas, Colin Studholme, Christian Heinrich
A Non-Local Fuzzy Segmentation Method: Application to Brain MRI. CAIP (2009)
Karl Sjöstrand, Valerie A. Cardenas, Rasmus Larsen, Colin Studholme
A generalization of voxel-wise procedures for high-dimensional statistical inference using ridge regression. Medical Imaging: Image Processing (2008)
Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
Atlas-Based Segmentation of the Germinal Matrix from in Utero Clinical MRI of the Fetal Brain. MICCAI (1) (2008)
Colin Studholme
Dense feature deformation morphometry: Incorporating DTI data into conventional MRI morphometry. Medical Image Anal. 12 (6) (2008)
Claudia E. Rodríguez-Carranza, Pratik Mukherjee, Daniel B. Vigneron, A. James Barkovich, Colin Studholme
A framework for in vivo quantification of regional brain folding in premature neonates. NeuroImage 41 (2) (2008)
Janet Blumenfeld, Colin Studholme, Julio Carballido-Gamio, Thomas M. Link, Sharmila Majumdar
Three-dimensional image registration of MR proximal femur images for the analysis of trabecular bone parameters. Medical Imaging: Image Processing (2008)
Kio Kim, Mads Hansen, Piotr A. Habas, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme
Intersection based registration of slice stacks to form 3D images of the human fetal brain. ISBI (2008)
Karl Sjöstrand, Egill Rostrup, C. Ryberg, Rasmus Larsen, Colin Studholme, H. Baezner, José M. Ferro, Franz Fazekas, Leonardo Pantoni, Domenico Inzitari, Gunhild Waldemar
Sparse Decomposition and Modeling of Anatomical Shape Variation. IEEE Trans. Medical Imaging 26 (12) (2007)
Valerie A. Cardenas, Colin Studholme, Stefan Gazdzinski, Timothy C. Durazzo, Dieter J. Meyerhoff
Deformation-based morphometry of brain changes in alcohol dependence and abstinence. NeuroImage 34 (3) (2007)
Colin Studholme
Incorporating DTI Data as a Constraint in Deformation Tensor Morphometry Between T1 MR Images. IPMI (2007)
Stathis Hadjidemetriou, Colin Studholme, Susanne G. Mueller, Mike Weiner, Norbert Schuff
Restoration of MRI data for field nonuniformities using high order neighborhood statistics. Medical Imaging: Image Processing (2007)
Claudia E. Rodríguez-Carranza, Pratik Mukherjee, Daniel B. Vigneron, A. James Barkovich, Colin Studholme
Comparing 3D Gyrification Index and area-independent curvature-based measures in quantifying neonatal brain folding. Medical Imaging: Image Processing (2007)
Colin Studholme, Valerie Cardenas
Population Based Analysis of Directional Information in Serial Deformation Tensor Morphometry. MICCAI (2) (2007)
Colin Studholme, Corina S. Drapaca, Bistra Iordanova, Valerie Cardenas
Deformation-based mapping of volume change from serial brain MRI in the presence of local tissue contrast change. IEEE Trans. Medical Imaging 25 (5) (2006)
Claudia E. Rodríguez-Carranza, Pratik Mukherjee, Daniel B. Vigneron, A. James Barkovich, Colin Studholme
A System for Measuring Regional Surface Folding of the Neonatal Brain from MRI. MICCAI (2) (2006)
Claudia E. Rodríguez-Carranza, François Rousseau, Bistra Iordanova, Orit A. Glenn, Daniel B. Vigneron, A. James Barkovich, Colin Studholme
An ISO-surface folding analysis method applied to premature neonatal brain development. Medical Imaging: Image Processing (2006)
Alex D. Leow, Andrea D. Klunder, Clifford R. Jack Jr., Arthur W. Toga, Anders M. Dale, Matt A. Bernstein, Paula J. Britson, Jeffrey L. Gunter, Chadwick P. Ward, Jennifer L. Whitwell, Bret J. Borowski, Adam Fleisher, Nick C. Fox, Danielle J. Harvey, John Kornak, Norbert Schuff, Colin Studholme, Gene E. Alexander, Michael W. Weiner, Paul M. Thompson
Longitudinal stability of MRI for mapping brain change using tensor-based morphometry. NeuroImage 31 (2) (2006)
François Rousseau, Andrew Maudsley, Andreas Ebel, Ammar Darkazanli, Patrice Weber, Krishnakumar Sivasankaran, Yingjian Yu, Colin Studholme
Evaluation of sub-voxel registration accuracy between MRI and 3D MR spectroscopy of the brain. Medical Imaging: Image Processing (2005)
François Rousseau, Orit A. Glenn, Bistra Iordanova, Claudia E. Rodríguez-Carranza, Daniel B. Vigneron, A. James Barkovich, Colin Studholme
A Novel Approach to High Resolution Fetal Brain MR Imaging. MICCAI (2005)
Corina S. Drapaca, Valerie Cardenas, Colin Studholme
Segmentation of tissue boundary evolution from brain MR image sequences using multi-phase level sets. Comput. Vis. Image Underst. 100 (3) (2005)
Valerie Cardenas, Colin Studholme
Co-analysis of Maps of Atrophy Rate and Atrophy State in Neurodegeneration. MICCAI (2) (2004)
Colin Studholme, Valerie Cardenas, Enmin Song, Frank Ezekiel, Andrew Maudsley, Michael Weiner
Accurate template-based correction of brain MRI intensity distortion with application to dementia and aging. IEEE Trans. Medical Imaging 23 (1) (2004)
Colin Studholme, Valerie Cardenas
A template free approach to volumetric spatial normalization of brain anatomy. Pattern Recognit. Lett. 25 (10) (2004)
Colin Studholme, Valerie Cardenas, Robert S. Blumenfeld, Norbert Schuff, Howard J. Rosen, Bruce L. Miller, Michael Weiner
Deformation tensor morphometry of semantic dementia with quantitative validation. NeuroImage 21 (4) (2004)
Corina S. Drapaca, Valerie Cardenas, Colin Studholme
Robust space-time extraction of ventricular surface evolution using multiphase level sets. Medical Imaging: Image Processing (2004)
Colin Studholme, Corina S. Drapaca, Valerie Cardenas, Michael Weiner
Challenges and Progress Toward Quantitative Deformation Morphometry of Gyral Anatomy. ISBI (2004)
Hal Blumenfeld, Michael Westerveld, Robert B. Ostroff, Susan D. Vanderhill, Jason Freeman, Alexandro Necochea, Paula Uranga, Tasha Tanhehco, Arien J. Smith, John P. Seibyl, Rik Stokking, Colin Studholme, Susan S. Spencer, I. George Zubal
Selective frontal, parietal, and temporal networks in generalized seizures. NeuroImage 19 (4) (2003)
A. Ardeshir Goshtasby, Lawrence H. Staib, Colin Studholme, Demetri Terzopoulos
Nonrigid image registration: guest editors' introduction. Comput. Vis. Image Underst. 89 (2-3) (2003)
Enmin Song, Valerie A. Cardenas, Diana Sacrey, Robert S. Blumenfeld, Michael W. Weiner, Colin Studholme
MRI tissue segmentation incorporating a bias field modulated smoothness prior. Medical Imaging: Image Processing (2003)
Colin Studholme
Simultaneous Population Based Image Alignment for Template Free Spatial Normalisation of Brain Anatomy. WBIR (2003)
Colin Studholme, Valerie Cardenas, Andrew Maudsley, Michael Weiner
An intensity consistent filtering approach to the analysis of deformation tensor derived maps of brain shape. NeuroImage 19 (4) (2003)
Colin Studholme, Valerie Cardenas, Andrew Maudsley, Michael Weiner
An Intensity Consistent Approach to the Cross Sectional Analysis of Deformation Tensor Derived Maps of Brain Shape. MICCAI (1) (2002)
Colin Studholme, Valerie Cardenas, Norbert Schuff, Howard J. Rosen, Bruce L. Miller, Michael Weiner
Detecting Spatially Consistent Structural Differences in Alzheimer's and Fronto Temporal Dementia Using Deformation Morphometry. MICCAI (2001)
Colin Studholme, Valerie A. Cardenas, Michael W. Weiner
Multiscale image and multiscale deformation of brain anatomy for building average brain atlases. Medical Imaging: Image Processing (2001)
Oskar M. Skrinjar, Colin Studholme, Arya Nabavi, James S. Duncan
Steps Toward a Stereo-Camera-Guided Biomechanical Model for Brain Shift Compensation. IPMI (2001)
Colin Studholme, R. Todd Constable, James S. Duncan
Accurate Alignment of Functional EPI Data to Anatomical MRI Using a Physics Based Distortion Model. IEEE Trans. Medical Imaging 19 (11) (2000)
Colin Studholme, R. Todd Constable, James S. Duncan
Phantom-based investigation of nonrigid registration constraints in mapping fMRI to anatomical MRI. Medical Imaging: Image Processing (2000)
Mark Holden, Erica R. E. Denton, Jo M. Jarosz, Tim C. S. Cox, Colin Studholme, David John Hawkes, Derek L. G. Hill
Detecting small anatomical change with 3D serial MR subtraction images. Medical Imaging: Image Processing (1999)
Colin Studholme, R. Todd Constable, James S. Duncan
Incorporating an Image Distortion Model in Non-rigid Alignment of EPI with Conventional MRI. IPMI (1999)
Colin Studholme, Derek L. G. Hill, David J. Hawkes
An overlap invariant entropy measure of 3D medical image alignment. Pattern Recognit. 32 (1) (1999)
Daniel Rueckert, Carmel Hayes, Colin Studholme, Paul E. Summers, Martin O. Leach, David J. Hawkes
Non-rigid Registration of Breast MR Images Using Mutual Information. MICCAI (1998)
Colin Studholme, David John Hawkes, Derek L. G. Hill
Normalized entropy measure for multimodality image alignment. Medical Imaging: Image Processing (1998)
J. Michael Fitzpatrick, Derek L. G. Hill, Yu Shyr, Jay B. West, Colin Studholme, Calvin R. Maurer Jr.
Visual Assessment of the Accuracy of Retrospective Registration of MR and CT Images of the Brain. IEEE Trans. Medical Imaging 17 (4) (1998)
Jay B. West, J. Michael Fitzpatrick, Matthew Yang Wang, Benoit M. Dawant, Calvin R. Maurer Jr., Robert M. Kessler, Robert J. Maciunas, Christian Barillot, Didier Lemoine, André M. F. Collignon, Frederik Maes, Paul Suetens, Dirk Vandermeulen, Petra A. van den Elsen, Paul F. Hemler, Sandy Napel, Thilaka S. Sumanaweera, Beth A. Harkness, Derek L. G. Hill, Colin Studholme, Grégoire Malandain, Xavier Pennec, Marilyn E. Noz, Gerald Q. Maguire Jr., Michael Pollack, Charles A. Pelizzari, Richard A. Robb, Dennis P. Hanson, Roger P. Woods
Comparison and evaluation of retrospective intermodality image registration techniques. Medical Imaging: Image Processing (1996)
Colin Studholme, John A. Little, Graeme P. Penney, Derek L. G. Hill, David J. Hawkes
Automated Multimodality Registration Using the Full Affine Transformation: Application to MR and CT Guided Skull Base Surgery. VBC (1996)
Colin Studholme, Derek L. G. Hill, David J. Hawkes
Automated 3-D registration of MR and CT images of the head. Medical Image Anal. 1 (2) (1996)
Colin Studholme, Derek L. G. Hill, David J. Hawkes
Automated 3D Registration of Truncated MR and CT Images of the Head. BMVC (1995)
Lewis D. Griffin, Alan C. F. Colchester, S. A. Röll, Colin Studholme
Hierarchical Segmentation Satisfying Constraints. BMVC (1994)
Colin Studholme, Derek L. G. Hill, David J. Hawkes
Using Voxel Similarity as a Measure of Medical Image Registration. BMVC (1994)
Derek L. G. Hill, Colin Studholme, David John Hawkes
Voxel similarity measures for automated image registration. VBC (1994)