Cinque S. Soto

Publication Activity (10 Years)

Years Active: 2013-2021
Publications (10 Years): 4

Top Topics

Computational Framework

Principal Component Analysis

Sequence Alignment

Top Venues

PLoS Comput. Biol.

Publications

Taylor Jones, Samuel B. Day, Luke Myers, James E. Crowe Jr., Cinque S. Soto
ClonoMatch: a tool for identifying homologous immunoglobulin and T-cell receptor sequences in large databases. Bioinform. 36 (24) (2021)
Cinque S. Soto, Jessica A. Finn, Jordan R. Willis, Samuel B. Day, Robert S. Sinkovits, Taylor Jones, Samuel Schmitz, Jens Meiler, Andre Branchizio, James E. Crowe Jr.
PyIR: a scalable wrapper for processing billions of immunoglobulin and T cell receptor sequences using IgBLAST. BMC Bioinform. 21 (1) (2020)
Alexander M. Sevy, Cinque S. Soto, Robin G. Bombardi, Jens Meiler, James E. Crowe Jr.
Immune repertoire fingerprinting by principal component analysis reveals shared features in subject groups with common exposures. BMC Bioinform. 20 (1) (2019)
Thomas Lemmin, Cinque S. Soto
Glycosylator: a Python framework for the rapid modeling of glycans. BMC Bioinform. 20 (1) (2019)
Marie Pancera, Tongqing Zhou, Aliaksandr Druz, Ivelin S. Georgiev, Cinque S. Soto, Jason Gorman, Jinghe Huang, Priyamvada Acharya, Gwo-Yu Chuang, Gilad Ofek, Guillaume B. E. Stewart-Jones, Jonathan Stuckey, Robert T. Bailer, M. Gordon Joyce, Mark K. Louder, Nancy Tumba, Yongping Yang, Baoshan Zhang, Myron S. Cohen, Barton F. Haynes, John R. Mascola, Lynn Morris, James B. Munro, Scott C. Blanchard, Walther Mothes, Mark Connors, Peter D. Kwong
Structure and immune recognition of trimeric pre-fusion HIV-1 Env. Nat. 514 (7523) (2014)
Thomas Lemmin, Cinque S. Soto, Graham Clinthorne, William F. DeGrado, Matteo Dal Peraro
PhoQ Histidine Kinase: Implications for Signal Transduction from Molecular Simulations. PLoS Comput. Biol. 9 (1) (2013)