Brock C. Christensen

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 13

Top Topics

Top Venues

Publications

Zarif L. Azher, Anish Suvarna, Ji-Qing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas, Louis J. Vaickus, Joshua J. Levy
Assessment of emerging pretraining strategies in interpretable multimodal deep learning for cancer prognostication. BioData Min. 16 (1) (2023)
Zarif L. Azher, Louis J. Vaickus, Lucas A. Salas, Brock C. Christensen, Joshua J. Levy
Development of biologically interpretable multimodal deep learning model for cancer prognosis prediction. SAC (2022)
Ramya Reddy, Ram Reddy, Cyril Sharma, Christopher R. Jackson, Scott Palisoul, Rachael Barney, Fred Kolling, Lucas A. Salas, Brock C. Christensen, Gabriel Brooks, Gregory Tsongalis, Louis J. Vaickus, Joshua J. Levy
Graph Neural Networks Ameliorate Potential Impacts of Imprecise Large-Scale Autonomous Immunofluorescence Labeling of Immune Cells on Whole Slide Images. GeoMedIA (2022)
Joshua J. Levy, Christian Haudenschild, Clark Barwick, Brock C. Christensen, Louis J. Vaickus
Topological Feature Extraction and Visualization of Whole Slide Images using Graph Neural Networks. PSB (2021)
Joshua J. Levy, Rebecca M. Lebeaux, Anne G. Hoen, Brock C. Christensen, Louis J. Vaickus, Todd A. MacKenzie
Longevity Associated Geometry Identified in Satellite Images: Sidewalks, Driveways and Hiking Trails. CoRR (2020)
Joshua J. Levy, Alexander J. Titus, Curtis L. Petersen, Youdinghuan Chen, Lucas A. Salas, Brock C. Christensen
MethylNet: an automated and modular deep learning approach for DNA methylation analysis. BMC Bioinform. 21 (1) (2020)
Joshua J. Levy, Lucas A. Salas, Brock C. Christensen, Aravindhan Sriharan, Louis J. Vaickus
PathFlowAI: A High-Throughput Workflow for Preprocessing, Deep Learning and Interpretation inDigital Pathology. PSB (2020)
Joshua J. Levy, Christopher R. Jackson, Aravindhan Sriharan, Brock C. Christensen, Louis J. Vaickus
Preliminary Evaluation of the Utility of Deep Generative Histopathology Image Translation at a Mid-sized NCI Cancer Center. BIOINFORMATICS (2020)
Joshua J. Levy, Alexander J. Titus, Lucas A. Salas, Brock C. Christensen
PyMethylProcess - convenient high-throughput preprocessing workflow for DNA methylation data. Bioinform. 35 (24) (2019)
Alexander J. Titus, Carly A. Bobak, Brock C. Christensen
A New Dimension of Breast Cancer Epigenetics - Applications of Variational Autoencoders with DNA Methylation. BIOINFORMATICS (2018)
Devin C. Koestler, Meaghan J. Jones, Joseph Usset, Brock C. Christensen, Rondi A. Butler, Michael S. Kobor, John K. Wiencke, Karl T. Kelsey
Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL). BMC Bioinform. 17 (2016)
Eugene Andres Houseman, Kevin C. Johnson, Brock C. Christensen
OxyBS: estimation of 5-methylcytosine and 5-hydroxymethylcytosine from tandem-treated oxidative bisulfite and bisulfite DNA. Bioinform. 32 (16) (2016)
Alexander J. Titus, Eugene Andres Houseman, Kevin C. Johnson, Brock C. Christensen
methyLiftover: cross-platform DNA methylation data integration. Bioinform. 32 (16) (2016)
Eugene Andres Houseman, William P. Accomando, Devin C. Koestler, Brock C. Christensen, Carmen J. Marsit, Heather H. Nelson, John K. Wiencke, Karl T. Kelsey
DNA methylation arrays as surrogate measures of cell mixture distribution. BMC Bioinform. 13 (2012)
Devin C. Koestler, Carmen J. Marsit, Brock C. Christensen, Margaret R. Karagas, Raphael Bueno, David J. Sugarbaker, Karl T. Kelsey, Eugene Andres Houseman
Semi-supervised recursively partitioned mixture models for identifying cancer subtypes. Bioinform. 26 (20) (2010)
Eugene Andres Houseman, Brock C. Christensen, Margaret R. Karagas, Margaret R. Wrensch, Heather H. Nelson, Joseph Wiemels, Shichun Zheng, John K. Wiencke, Karl T. Kelsey, Carmen J. Marsit
Copy number variation has little impact on bead-array-based measures of DNA methylation. Bioinform. 25 (16) (2009)
Eugene Andres Houseman, Brock C. Christensen, Ru-Fang Yeh, Carmen J. Marsit, Margaret R. Karagas, Margaret R. Wrensch, Heather H. Nelson, Joseph Wiemels, Shichun Zheng, John K. Wiencke, Karl T. Kelsey
Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions. BMC Bioinform. 9 (2008)
Yuanyuan Xiao, Mark R. Segal, Eugene Andres Houseman, Joseph Wiemels, John K. Wiencke, Shichun Zheng, Margaret R. Wrensch, Brock C. Christensen, Carmen J. Marsit, Karl T. Kelsey, Heather H. Nelson, Margaret R. Karagas, Ru-Fang Yeh
Analysis of High-throughput DNA Methylation Bead Arrays Utilizing Bayesian Genotyping Algorithms. BMEI (1) (2008)