Bülent Arman Aksoy

Publication Activity (10 Years)

Years Active: 2013-2020
Publications (10 Years): 5

Top Topics

High Dimensional

Cancer Patients

Top Venues

Database J. Biol. Databases Curation

Nucleic Acids Res.

Publications

Igor V. Rodchenkov, Ozgun Babur, Augustin Luna, Bülent Arman Aksoy, Jeffrey V. Wong, Dylan Fong, Max Franz, Metin Can Siper, Manfred Cheung, Michael Wrana, Harsh Mistry, Logan Mosier, Jonah Dlin, Qizhi Wen, Caitlin O'Callaghan, Wanxin Li, Geoffrey Elder, Peter T. Smith, Christian Dallago, Ethan Cerami, Benjamin Gross, Ugur Dogrusoz, Emek Demir, Gary D. Bader, Chris Sander
Pathway Commons 2019 Update: integration, analysis and exploration of pathway data. Nucleic Acids Res. 48 (Database-Issue) (2020)
Eric Czech, Bülent Arman Aksoy, Pinar Aksoy, Jeff Hammerbacher
Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging. BMC Bioinform. 20 (1) (2019)
Bülent Arman Aksoy, Vlado Dancík, Kenneth Smith, Jessica N. Mazerik, Zhou Ji, Benjamin E. Gross, Olga Nikolova, Nadia Jaber, Andrea Califano, Stuart L. Schreiber, Daniela S. Gerhard, Leandro Hermida, Subhashini Jagu, Chris Sander, Aris Floratos, Paul A. Clemons
CTD2 Dashboard: a searchable web interface to connect validated results from the Cancer Target Discovery and Development Network. Database J. Biol. Databases Curation 2017 (2017)
Dan Vanderkam, Bülent Arman Aksoy, Isaac Hodes, Jaclyn Perrone, Jeff Hammerbacher
pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data. Bioinform. 32 (15) (2016)
Augustin Luna, Özgün Babur, Bülent Arman Aksoy, Emek Demir, Chris Sander
PaxtoolsR: pathway analysis in R using Pathway Commons. Bioinform. 32 (8) (2016)
Bülent Arman Aksoy, Emek Demir, Özgün Babur, Weiqing Wang, Xiaohong Jing, Nikolaus Schultz, Chris Sander
Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles. Bioinform. 30 (14) (2014)
Özgün Babur, Bülent Arman Aksoy, Igor V. Rodchenkov, Selçuk Onur Sümer, Chris Sander, Emek Demir
Pattern search in BioPAX models. Bioinform. 30 (1) (2014)
Emek Demir, Özgün Babur, Igor V. Rodchenkov, Bülent Arman Aksoy, Ken I. Fukuda, Benjamin E. Gross, Selçuk Onur Sümer, Gary D. Bader, Chris Sander
Using Biological Pathway Data with Paxtools. PLoS Comput. Biol. 9 (9) (2013)
Bülent Arman Aksoy, Jianjiong Gao, Gideon Dresdner, Weiqing Wang, Alex Root, Xiaohong Jing, Ethan G. Cerami, Chris Sander
PiHelper: an open source framework for drug-target and antibody-target data. Bioinform. 29 (16) (2013)