Anne Shiu

ORCID

Publication Activity (10 Years)

Years Active: 2006-2024
Publications (10 Years): 17

Top Venues

Adv. Appl. Math.

CoRR

SIAM J. Appl. Algebra Geom.

SIAM J. Appl. Dyn. Syst.

University of California, Berkeley, USA (PHD)

Education History

University of California, Berkeley, USA

PHD

Publications

Allison McClure, Anne Shiu
On the connectedness of multistationarity regions of small reaction networks. J. Symb. Comput. 125 (2024)
Patrick Chan, Katherine Johnston, Joseph Lent, Alexander Ruys de Perez, Anne Shiu
Nondegenerate Neural Codes and Obstructions to Closed-Convexity. SIAM J. Discret. Math. 37 (1) (2023)
Alexander Ruys de Perez, Laura Felicia Matusevich, Anne Shiu
Wheels: A new criterion for non-convexity of neural codes. Adv. Appl. Math. 150 (2023)
Cashous Bortner, Elizabeth Gross, Nicolette Meshkat, Anne Shiu, Seth Sullivant
Identifiability of linear compartmental tree models and a general formula for input-output equations. Adv. Appl. Math. 146 (2023)
Badal Joshi, Nidhi Kaihnsa, Tung D. Nguyen, Anne Shiu
Prevalence of Multistationarity and Absolute Concentration Robustness in Reaction Networks. SIAM J. Appl. Math. 83 (6) (2023)
Elizabeth Gross, Nicolette Meshkat, Anne Shiu
Identifiability of linear compartmental models: The singular locus. Adv. Appl. Math. 133 (2022)
Alexander Ruys de Perez, Laura Felicia Matusevich, Anne Shiu
Neural codes and the factor complex. Adv. Appl. Math. 114 (2020)
Aaron Chen, Florian Frick, Anne Shiu
Neural Codes, Decidability, and a New Local Obstruction to Convexity. SIAM J. Appl. Algebra Geom. 3 (1) (2019)
Elizabeth Gross, Heather A. Harrington, Nicolette Meshkat, Anne Shiu
Linear Compartmental Models: Input-Output Equations and Operations That Preserve Identifiability. SIAM J. Appl. Math. 79 (4) (2019)
Rebecca Garcia, Luis David García-Puente, Ryan Kruse, Jessica Liu, Dane Miyata, Ethan Petersen, Kaitlyn Phillipson, Anne Shiu
Gröbner bases of neural ideals. Int. J. Algebra Comput. 28 (4) (2018)
Carina Curto, Elizabeth Gross, Jack Jeffries, Katherine Morrison, Zvi Rosen, Anne Shiu, Nora Youngs
Algebraic signatures of convex and non-convex codes. CoRR (2018)
Aaron Chen, Florian Frick, Anne Shiu
Neural codes, decidability, and a new local obstruction to convexity. CoRR (2018)
Badal Joshi, Anne Shiu
Which Small Reaction Networks Are Multistationary? SIAM J. Appl. Dyn. Syst. 16 (2) (2017)
Caitlin Lienkaemper, Anne Shiu, Zev Woodstock
Obstructions to convexity in neural codes. Adv. Appl. Math. 85 (2017)
Carina Curto, Elizabeth Gross, Jack Jeffries, Katherine Morrison, Mohamed Omar, Zvi Rosen, Anne Shiu, Nora Youngs
What Makes a Neural Code Convex? SIAM J. Appl. Algebra Geom. 1 (1) (2017)
Stefan Müller, Elisenda Feliu, Georg Regensburger, Carsten Conradi, Anne Shiu, Alicia Dickenstein
Sign Conditions for Injectivity of Generalized Polynomial Maps with Applications to Chemical Reaction Networks and Real Algebraic Geometry. Found. Comput. Math. 16 (1) (2016)
Bryan Félix, Anne Shiu, Zev Woodstock
Analyzing multistationarity in chemical reaction networks using the determinant optimization method. Appl. Math. Comput. (2016)
Manoj Gopalkrishnan, Ezra Miller, Anne Shiu
A Geometric Approach to the Global Attractor Conjecture. SIAM J. Appl. Dyn. Syst. 13 (2) (2014)
Manoj Gopalkrishnan, Ezra Miller, Anne Shiu
A projection argument for differential inclusions, with applications to persistence of mass-action kinetics CoRR (2012)
François Boulier, Anne Shiu, Thomas Sturm, Andreas Weber
Symbolic Methods for Chemical Reaction Networks (Dagstuhl Seminar 12462). Dagstuhl Reports 2 (11) (2012)
Badal Joshi, Anne Shiu
Simplifying the Jacobian Criterion for Precluding Multistationarity in Chemical Reaction Networks. SIAM J. Appl. Math. 72 (3) (2012)
David F. Anderson, Anne Shiu
The Dynamics of Weakly Reversible Population Processes near Facets. SIAM J. Appl. Math. 70 (6) (2010)
Gheorghe Craciun, Alicia Dickenstein, Anne Shiu, Bernd Sturmfels
Toric dynamical systems. J. Symb. Comput. 44 (11) (2009)
Jason Morton, Lior Pachter, Anne Shiu, Bernd Sturmfels, Oliver Wienand
Convex Rank Tests and Semigraphoids. SIAM J. Discret. Math. 23 (3) (2009)
Raymond Hemmecke, Jason Morton, Anne Shiu, Bernd Sturmfels, Oliver Wienand
Three Counter-Examples on Semi-Graphoids. Comb. Probab. Comput. 17 (2) (2008)
Anne Shiu
The Smallest Multistationary Mass-Preserving Chemical Reaction Network. AB (2008)
Jason Morton, Lior Pachter, Anne Shiu, Bernd Sturmfels, Oliver Wienand
Geometry of rank tests. Probabilistic Graphical Models (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Anne Shiu