Andrzej M. Kierzek

Publication Activity (10 Years)

Years Active: 2002-2018
Publications (10 Years): 3

Top Topics

Biological Processes

Steady State Simulation

Gene Regulation

Interaction Networks

Top Venues

Fundam. Informaticae

Sci. Comput. Program.

Publications

Marek Grabowski, Grzegorz Bokota, Jacek Sroka, Andrzej M. Kierzek
Verification of Dynamic Behaviour in Qualitative Molecular Networks Describing Gene Regulation, Signalling and Whole-cell Metabolism. Fundam. Informaticae 160 (1-2) (2018)
Kamil Kedzia, Wojtek Ptak, Jacek Sroka, Andrzej M. Kierzek
Simulation of multicellular populations with Petri nets and genome scale intracellular networks. Sci. Comput. Program. 157 (2018)
Wojciech Ptak, Andrzej M. Kierzek, Jacek Sroka
AB-QSSPN: Integration of Agent-Based Simulation of Cellular Populations with Quasi-Steady State Simulation of Genome Scale Intracellular Networks. Petri Nets (2016)
Ciarán P. Fisher, Nicholas J. Plant, J. Bernadette Moore, Andrzej M. Kierzek
QSSPN: dynamic simulation of molecular interaction networks describing gene regulation, signalling and whole-cell metabolism in human cells. Bioinform. 29 (24) (2013)
Rebecca B. Hoyle, Daniele Avitabile, Andrzej M. Kierzek
Equation-Free Analysis of Two-Component System Signalling Model Reveals the Emergence of Co-Existing Phenotypes in the Absence of Multistationarity. PLoS Comput. Biol. 8 (6) (2012)
Bhushan K. Bonde, Dany J. V. Beste, Emma Laing, Andrzej M. Kierzek, Johnjoe McFadden
. PLoS Comput. Biol. 7 (6) (2011)
Jacek Sroka, Lukasz Krupa, Andrzej M. Kierzek, Jerzy Tyszkiewicz
workbench. Bioinform. 27 (18) (2011)
Albert Gevorgyan, Michael E. Bushell, Claudio Avignone-Rossa, Andrzej M. Kierzek
SurreyFBA: a command line tool and graphics user interface for constraint-based modeling of genome-scale metabolic reaction networks. Bioinform. 27 (3) (2011)
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwozdz, Dariusz Leniowski, Jakub Lacki, Mateusz Markowski, Claudio Avignone-Rossa, Michael E. Bushell, Johnjoe McFadden, Andrzej M. Kierzek
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks via a web interface. BMC Bioinform. 12 (2011)
Jacek Sroka, Grzegorz Kaczor, Jerzy Tyszkiewicz, Andrzej M. Kierzek
XQTav: an XQuery processor for Taverna environment. Bioinform. 22 (10) (2006)
Andrzej M. Kierzek
STOCKS: STOChastic Kinetic Simulations of biochemical systems with Gillespie algorithm. Bioinform. 18 (3) (2002)