Andrey A. Ptitsyn

Publication Activity (10 Years)

Years Active: 1994-2015
Publications (10 Years): 1

Top Topics

Computational Science

Fault Tolerance

High Performance Computing

Top Venues

Publications

Nagarajan Kathiresan, Rashid Al-Ali, Puthen V. Jithesh, Tariq AbuZaid, Ramzi Temanni, Andrey A. Ptitsyn
Optimization of data-intensive next generation sequencing in high performance computing. BIBE (2015)
Leonid L. Moroz, Kevin M. Kocot, Mathew R. Citarella, Sohn Dosung, Tigran P. Norekian, Inna S. Povolotskaya, Anastasia P. Grigorenko, Christopher Dailey, Eugene Berezikov, Katherine M. Buckley, Andrey A. Ptitsyn, Denis A. Reshetov, Krishanu Mukherjee, Tatiana P. Moroz, Yelena Bobkova, Fahong Yu, Vladimir V. Kapitonov, Jerzy Jurka, Yuri V. Bobkov, Joshua J. Swore, David O. Girardo, Alexander Fodor, Fedor Gusev, Rachel Sanford, Rebecca Bruders, Ellen Kittler, Claudia E. Mills, Jonathan P. Rast, Romain Derelle, Victor V. Solovyev, Fyodor A. Kondrashov, Billie J. Swalla, Jonathan V. Sweedler, Evgeny I. Rogaev, Kenneth M. Halanych, Andrea B. Kohn
The ctenophore genome and the evolutionary origins of neural systems Open. Nat. 510 (7503) (2014)
Andrey A. Ptitsyn, Leonid L. Moroz
Computational workflow for analysis of gain and loss of genes in distantly related genomes. BMC Bioinform. 13 (S-15) (2012)
Andrey A. Ptitsyn, Amber Schlater, Shane Kanatous
Transformation of metabolism with age and lifestyle in Antarctic seals: a case study of systems biology approach to cross-species microarray experiment. BMC Syst. Biol. 4 (2010)
Andrey A. Ptitsyn
Computational analysis of gene expression space associated with metastatic cancer. BMC Bioinform. 10 (S-11) (2009)
Andrey A. Ptitsyn, Michael M. Weil, Douglas H. Thamm
Systems biology approach to identification of biomarkers for metastatic progression in cancer. BMC Bioinform. 9 (S-9) (2008)
Andrey A. Ptitsyn
Comprehensive analysis of circadian periodic pattern in plant transcriptome. BMC Bioinform. 9 (S-9) (2008)
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble
Digital Signal Processing Reveals Circadian Baseline Oscillation in Majority of Mammalian Genes. PLoS Comput. Biol. 3 (6) (2007)
Andrey A. Ptitsyn, Jeffrey M. Gimble
Analysis of circadian pattern reveals tissue-specific alternative transcription in leptin signaling pathway. BMC Bioinform. 8 (S-7) (2007)
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble
Permutation test for periodicity in short time series data. BMC Bioinform. 8 (2007)
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble
Permutation test for periodicity in short time series data. BMC Bioinform. 7 (S-2) (2006)
Andrey A. Ptitsyn, Sanjin Zvonic, Steven A. Conrad, L. Keith Scott, Randall L. Mynatt, Jeffrey M. Gimble
Circadian Clocks Are Resounding in Peripheral Tissues. PLoS Comput. Biol. 2 (3) (2006)
Jonathan D. Wren, Yuriy Gusev, Andrey A. Ptitsyn, Stephen Winters-Hilt
Proceedings of the Third Annual Conference of the MidSouth Computational Biology and Bioinformatics Society. BMC Bioinform. 7 (S-2) (2006)
Andrey A. Ptitsyn, Winston Hide
CLU: A new algorithm for EST clustering. BMC Bioinform. 6 (S-2) (2005)
Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach
A genetic algorithm for designing gene family-specific oligonucleotide sets used for hybridization: the G protein-coupled receptor protein superfamily. Bioinform. 14 (3) (1998)
Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach
A genetic algorithm for designing gene family specific oligonucleotide sets used for hybridization. The G Protein-coupled receptor Protein superfamily.. German Conference on Bioinformatics (1997)
Andrey A. Ptitsyn, Dmitry A. Grigorovich
Object-oriented data handler for sequence analysis software development. Comput. Appl. Biosci. 11 (6) (1995)
Victor B. Strelets, Andrey A. Ptitsyn, Luciano Milanesi, Hwa A. Lim
Data bank homology search algorithm with linear computation complexity. Comput. Appl. Biosci. 10 (3) (1994)