Andrew E. Torda

Publication Activity (10 Years)

Years Active: 1994-2015
Publications (10 Years): 1

Top Topics

Industrial Applications

Sequence Alignment

Similarity Metric

Top Venues

J. Cheminformatics

PLoS Comput. Biol.

Algorithms Mol. Biol.

Publications

Chakravarthy Marella, Andrew E. Torda, Dominik Schwudke
The LUX Score: A Metric for Lipidome Homology. PLoS Comput. Biol. 11 (9) (2015)
Andrew E. Torda
Not assessing the efficiency of multiple sequence alignment programs. Algorithms Mol. Biol. 9 (2014)
Tim Wiegels, Stefan Bienert, Andrew E. Torda
Fast alignment and comparison of RNA structures. Bioinform. 29 (5) (2013)
Martin Mosisch, Jan Simons, Lutz Hilterhaus, Andrew E. Torda
Modifications to glucose-6-phosphate dehydrogenase for industrial applications: predictions and tests. J. Cheminformatics 5 (S-1) (2013)
Nikolai Hecker, Tim Wiegels, Andrew E. Torda
RNA secondary structure diagrams for very large molecules: RNAfdl. Bioinform. 29 (22) (2013)
Jens Kleesiek, Andrew E. Torda
RNA secondary structure prediction using a self-consistent mean field approach. J. Comput. Chem. 31 (6) (2010)
Thomas Margraf, Gundolf Schenk, Andrew E. Torda
The SALAMI protein structure search server. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Gundolf Schenk, Thomas Margraf, Andrew E. Torda
Protein sequence and structure alignments within one framework. Algorithms Mol. Biol. 3 (2008)
Andrew E. Torda, Thomas Lengauer
Editorial. Bioinform. 22 (10) (2006)
Andrew E. Torda, James B. Procter, Thomas Huber
Wurst: a protein threading server with a structural scoring function, sequence profiles and optimized substitution matrices. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Zsuzsanna Dosztányi, Andrew E. Torda
Amino acid similarity matrices based on force fields. Bioinform. 17 (8) (2001)
Thomas Huber, Andrew E. Torda
Protein sequence threading, the alignment problem, and a two-step strategy. J. Comput. Chem. 20 (14) (1999)
Thomas Huber, Anthony J. Russell, Daniel Ayers, Andrew E. Torda
Sausage: protein threading with flexible force fields. Bioinform. 15 (12) (1999)
Andrew E. Torda, Wilfred F. van Gunsteren
Algorithms for Clustering Molecular Dynamics Confogurations. J. Comput. Chem. 15 (12) (1994)
Thomas Huber, Andrew E. Torda, Wilfred F. van Gunsteren
Local elevation: A method for improving the searching properties of molecular dynamics simulation. J. Comput. Aided Mol. Des. 8 (6) (1994)