Anan Li

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 21

Top Topics

Segmentation Method

Dense Reconstruction

Top Venues

Neuroinformatics

Frontiers Neuroinformatics

Publications

Jianran Ren, Jingyi Che, Peicong Gong, Xiaojun Wang, Xiangning Li, Anan Li, Chi Xiao
Cross comparison representation learning for semi-supervised segmentation of cellular nuclei in immunofluorescence staining. Comput. Biol. Medicine 171 (2024)
Tianfang Zhu, Gang Yao, Dongli Hu, Chuangchuang Xie, Pengcheng Li, Xiaoquan Yang, Hui Gong, Qingming Luo, Anan Li
Data-Driven Morphological Feature Perception of Single Neuron With Graph Neural Network. IEEE Trans. Medical Imaging 42 (10) (2023)
Yuxin Li, Xuhua Liu, Xueyan Jia, Tao Jiang, Jianghao Wu, Qianlong Zhang, Junhuai Li, Xiangning Li, Anan Li
A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution. Bioinform. 39 (4) (2023)
Xin Liu, Anan Li, Yue Luo, Shengda Bao, Tao Jiang, Xiangning Li, Jing Yuan, Zhao Feng
An interactive image segmentation method for the anatomical structures of the main olfactory bulb with micro-level resolution. Frontiers Neuroinformatics 17 (2023)
Ruifang Cao, Yunchao Ling, Jiayue Meng, Ao Jiang, Ruijin Luo, Qinwen He, Anan Li, Yujie Chen, Zoutao Zhang, Feng Liu, Yixue Li, Guoqing Zhang
SMDB: a Spatial Multimodal Data Browser. Nucleic Acids Res. 51 (W1) (2023)
Xiaokang Chai, Yachao Di, Zhao Feng, Yue Guan, Guoqing Zhang, Anan Li, Qingming Luo
Deep learning-based large-scale named entity recognition for anatomical region of mammalian brain. Quant. Biol. 10 (3) (2022)
Yuxin Li, Tong Ren, Junhuai Li, Huaijun Wang, Xiangning Li, Anan Li
VBNet: An end-to-end 3D neural network for vessel bifurcation point detection in mesoscopic brain images. Comput. Methods Programs Biomed. 214 (2022)
Qing Huang, Tingting Cao, Shaoqun Zeng, Anan Li, Tingwei Quan
Minimizing Probability Graph Connectivity Cost for Discontinuous Filamentary Structures Tracing in Neuron Image. IEEE J. Biomed. Health Informatics 26 (7) (2022)
Tianfang Zhu, Yue Guan, Anan Li
Joint Optical Neuroimaging Denoising with Semantic Tasks. CoRR (2021)
Hang Zhou, Shiwei Li, Anan Li, Qing Huang, Feng Xiong, Ning Li, Jiacheng Han, Hongtao Kang, Yijun Chen, Yun Li, Huimin Lin, Yu-Hui Zhang, Xiaohua Lv, Xiuli Liu, Hui Gong, Qingming Luo, Shaoqun Zeng, Tingwei Quan
GTree: an Open-source Tool for Dense Reconstruction of Brain-wide Neuronal Population. Neuroinformatics 19 (2) (2021)
Hong Ni, Zhao Feng, Yue Guan, Xueyan Jia, Wu Chen, Tao Jiang, Qiuyuan Zhong, Jing Yuan, Miao Ren, Xiangning Li, Hui Gong, Qingming Luo, Anan Li
DeepMapi: a Fully Automatic Registration Method for Mesoscopic Optical Brain Images Using Convolutional Neural Networks. Neuroinformatics 19 (2) (2021)
Tianfang Zhu, Yue Guan, Anan Li
PointManifoldCut: Point-wise Augmentation in the Manifold for Point Clouds. CoRR (2021)
Tianfang Zhu, Yutong Han, Anan Li, Jing Yuan, Hui Gong, Yue Guan
Denoising Across Data Acquisition Modalities for Mesoscopic Scale Optical Neuroimaging. IEEE Access 9 (2021)
Siqi Jiang, Zhengyu Pan, Zhao Feng, Yue Guan, Miao Ren, Zhangheng Ding, Shangbin Chen, Hui Gong, Qingming Luo, Anan Li
Skeleton optimization of neuronal morphology based on three-dimensional shape restrictions. BMC Bioinform. 21 (1) (2020)
Xiaofeng Xu, Yue Guan, Hui Gong, Zhao Feng, Wenjuan Shi, Anan Li, Miao Ren, Jing Yuan, Qingming Luo
Automated Brain Region Segmentation for Single Cell Resolution Histological Images Based on Markov Random Field. Neuroinformatics 18 (2) (2020)
Yuxin Li, Anan Li, Junhuai Li, Hongfang Zhou, Ting Cao, Huaijun Wang, Kan Wang
webTDat: A Web-Based, Real-Time, 3D Visualization Framework for Mesoscopic Whole-Brain Images. Frontiers Neuroinformatics 14 (2020)
Shiwei Li, Tingwei Quan, Hang Zhou, Qing Huang, Tao Guan, Yijun Chen, Cheng Xu, Hongtao Kang, Anan Li, Ling Fu, Qingming Luo, Hui Gong, Shaoqun Zeng
Brain-Wide Shape Reconstruction of a Traced Neuron Using the Convex Image Segmentation Method. Neuroinformatics 18 (2) (2020)
Anan Li, Yue Guan, Hui Gong, Qingming Luo
Challenges of Processing and Analyzing Big Data in Mesoscopic Whole-brain Imaging. Genom. Proteom. Bioinform. 17 (4) (2019)
Shiwei Li, Tingwei Quan, Hang Zhou, Fangfang Yin, Anan Li, Ling Fu, Qingming Luo, Hui Gong, Shaoqun Zeng
Identifying Weak Signals in Inhomogeneous Neuronal Images for Large-Scale Tracing of Sparsely Distributed Neurites. Neuroinformatics 17 (4) (2019)
Shiwei Li, Hang Zhou, Tingwei Quan, Jing Li, Yuxin Li, Anan Li, Qingming Luo, Hui Gong, Shaoqun Zeng
SparseTracer: the Reconstruction of Discontinuous Neuronal Morphology in Noisy Images. Neuroinformatics 15 (2) (2017)
Zhao Feng, Anan Li, Hui Gong, Qingming Luo
An Automatic Method for Nucleus Boundary Segmentation Based on a Closed Cubic Spline. Frontiers Neuroinformatics 10 (2016)
Jingpeng Wu, Yong He, Zhongqin Yang, Congdi Guo, Qingming Luo, Wei Zhou, Shangbin Chen, Anan Li, Benyi Xiong, Tao Jiang, Hui Gong
3D BrainCV: Simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution. NeuroImage 87 (2014)
Bo Li, Ling Gong, Ruiqi Wu, Anan Li, Fuqiang Xu
Complex relationship between BOLD-fMRI and electrophysiological signals in different olfactory bulb layers. NeuroImage 95 (2014)
Hui Gong, Shaoqun Zeng, Cheng Yan, Xiaohua Lv, Zhongqin Yang, Tonghui Xu, Zhao Feng, Wenxiang Ding, Xiaoli Qi, Anan Li, Jingpeng Wu, Qingming Luo
Continuously tracing brain-wide long-distance axonal projections in mice at a one-micron voxel resolution. NeuroImage 74 (2013)