Alla Karnovsky

Publication Activity (10 Years)

Years Active: 2010-2020
Publications (10 Years): 4

Top Topics

Ontology Driven

Medical Subject Headings

Asymptotic Convergence

Top Venues

Publications

Maureen Kachman, Hani Habra, William Duren, Janis E. Wigginton, Peter Sajjakulnukit, George Michailidis, Charles F. Burant, Alla Karnovsky
Deep annotation of untargeted LC-MS metabolomics data with Binner. Bioinform. 36 (6) (2020)
Jing Ma, Alla Karnovsky, Farsad Afshinnia, Janis E. Wigginton, Daniel J. Rader, Loki Natarajan, Kumar Sharma, Anna C. Porter, Mahboob Rahman, Jiang He, Lee Hamm, Tariq Shafi, Debbie S. Gipson, Crystal Gadegbeku, Harold Feldman, George Michailidis
Differential network enrichment analysis reveals novel lipid pathways in chronic kidney disease. Bioinform. 35 (18) (2019)
Sumanta Basu, William Duren, Charles R. Evans, Charles F. Burant, George Michailidis, Alla Karnovsky
Sparse network modeling and metscape-based visualization methods for the analysis of large-scale metabolomics data. Bioinform. 33 (10) (2017)
Raymond G. Cavalcante, Snehal Patil, Terry E. Weymouth, Kestutis G. Bendinskas, Alla Karnovsky, Maureen A. Sartor
ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts. Bioinform. 32 (10) (2016)
William Duren, Terry E. Weymouth, Tim Hull, Gilbert S. Omenn, Brian D. Athey, Charles F. Burant, Alla Karnovsky
MetDisease - connecting metabolites to diseases via literature. Bioinform. 30 (15) (2014)
Frank J. Manion, Elizabeth Eisenhauer, Alla Karnovsky, Yongqun He, Yu Lin, Marcelline R. Harris
Analysis of Content Coverage for Informed Consent Concepts. AMIA (2014)
Yu Lin, Marcelline R. Harris, Frank J. Manion, Elizabeth Eisenhauer, Bin Zhao, Wei Shi, Alla Karnovsky, Yongqun He
Development of a BFO-Based Informed Consent Ontology (ICO). ICBO (2014)
Richard C. McEachin, Keerthi S. Sannareddy, James D. Cavalcoli, Alla Karnovsky, Jacqueline M. Vink, Maureen A. Sartor
Convergence of genetic influences in comorbidity. BMC Bioinform. 13 (S-2) (2012)
Alla Karnovsky, Terry E. Weymouth, Tim Hull, V. Glenn Tarcea, Giovanni Scardoni, Carlo Laudanna, Maureen A. Sartor, Kathleen A. Stringer, H. V. Jagadish, Charles F. Burant, Brian D. Athey, Gilbert S. Omenn
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data. Bioinform. 28 (3) (2012)
Maureen A. Sartor, Alexander S. Ade, Zach Wright, David J. States, Gilbert S. Omenn, Brian D. Athey, Alla Karnovsky
Metab2MeSH: annotating compounds with medical subject headings. Bioinform. 28 (10) (2012)
Alla Karnovsky, Frank J. Manion, Terry E. Weymouth, V. Glenn Tarcea, Lisa Powell, Blake Roessler, Nicholas Steneck
Development of an Informed Consent Ontology to Support Biobanking. AMIA (2012)
Maureen A. Sartor, Vasudeva Mahavisno, Venkateshwar G. Keshamouni, James D. Cavalcoli, Zach Wright, Alla Karnovsky, Rork Kuick, H. V. Jagadish, Barbara Mirel, Terry E. Weymouth, Brian D. Athey, Gilbert S. Omenn
ConceptGen: a gene set enrichment and gene set relation mapping tool. Bioinform. 26 (4) (2010)
Jing Gao, V. Glenn Tarcea, Alla Karnovsky, Barbara R. Mirel, Terry E. Weymouth, Christopher W. Beecher, James D. Cavalcoli, Brian D. Athey, Gilbert S. Omenn, Charles F. Burant, H. V. Jagadish
Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks. Bioinform. 26 (7) (2010)