Alistair G. Rust

Publication Activity (10 Years)

Years Active: 1997-2013
Publications (10 Years): 0

Top Topics

Transcription Factor Binding Sites

Binary Classification

Negative Examples

Top Venues

Publications

Mamunur Rashid, Carla Daniela Robles-Espinoza, Alistair G. Rust, David J. Adams
Cake: a bioinformatics pipeline for the integrated analysis of somatic variants in cancer genomes. Bioinform. 29 (17) (2013)
Jeroen de Ridder, Jaap Kool, Anthony Uren, Jan Bot, Johann de Jong, Alistair G. Rust, Anton Berns, Maarten van Lohuizen, David J. Adams, Lodewyk F. A. Wessels, Marcel J. T. Reinders
Mutational Genomics for Cancer Pathway Discovery. PRIB (2013)
Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson
Using Varying Negative Examples to Improve Computational Predictions of Transcription Factor Binding Sites. EANN (2012)
Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson
Improving Transcription Factor Binding Site Predictions by Using Randomised Negative Examples. IPCAT (2012)
Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson
Effect of Using Varying Negative Examples in Transcription Factor Binding Site Predictions. EvoBio (2011)
Faisal Ibne Rezwan, Yi Sun, Neil Davey, Rod Adams, Alistair G. Rust, Mark Robinson
Using Randomised Vectors in Transcription Factor Binding Site Predictions. ICMLA (2010)
Yi Sun, Cristina González Castellano, Mark Robinson, Rod Adams, Alistair G. Rust, Neil Davey
Using pre & post-processing methods to improve binding site predictions. Pattern Recognit. 42 (9) (2009)
Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey
Integrating genomic binding site predictions using real-valued meta classifiers. Neural Comput. Appl. 18 (6) (2009)
Stephen A. Ramsey, Sandy L. Klemm, Daniel E. Zak, Kathleen A. Kennedy, Vesteinn Thorsson, Bin Li, Mark Gilchrist, Elizabeth S. Gold, Carrie D. Johnson, Vladimir Litvak, Garnet Navarro, Jared C. Roach, Carrie M. Rosenberger, Alistair G. Rust, Natalya Yudkovsky, Alan Aderem, Ilya Shmulevich
Uncovering a Macrophage Transcriptional Program by Integrating Evidence from Motif Scanning and Expression Dynamics. PLoS Comput. Biol. 4 (3) (2008)
Mark Robinson, Cristina González Castellano, Faisal Ibne Rezwan, Rod Adams, Neil Davey, Alistair G. Rust, Yi Sun
Combining experts in order to identify binding sites in yeast and mouse genomic data. Neural Networks 21 (6) (2008)
Yi Sun, Mark Robinson, Rod Adams, Alistair G. Rust, Neil Davey
Prediction of Binding Sites in the Mouse Genome Using Support Vector Machines. ICANN (2) (2008)
Yi Sun, Mark Robinson, Rod Adams, Neil Davey, Alistair G. Rust
Predicting Binding Sites in the Mouse Genome. ICMLA (2007)
Mark Robinson, Offer Sharabi, Yi Sun, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey
Using Real-Valued Meta Classifiers to Integrate and Contextualize Binding Site Predictions. ICANNGA (1) (2007)
Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey
Using Feature Selection Filtering Methods for Binding Site Predictions. IEEE ICCI (2006)
Mark Robinson, Yi Sun, Rene te Boekhorst, Paul Kaye, Rod Adams, Neil Davey, Alistair G. Rust
Improving Computational Predictions of Cis- Regulatory Binding Sites. Pacific Symposium on Biocomputing (2006)
Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhorst, Alistair G. Rust, Neil Davey
Using sampling methods to improve binding site predictions. ESANN (2006)
Irina I. Abnizova, Alistair G. Rust, Mark Robinson, Rene te Boekhorst, Walter R. Gilks
Transcription Binding Site Prediction Using Markov Models. J. Bioinform. Comput. Biol. 4 (2) (2006)
Yi Sun, Mark Robinson, Rod Adams, Paul Kaye, Alistair G. Rust, Neil Davey
Integrating Binding Site Predictions Using Non-linear Classification Methods. Deterministic and Statistical Methods in Machine Learning (2004)
Michele E. Clamp, T. Daniel Andrews, Daniel Barker, Paul Bevan, Graham Cameron, Yuan Chen, Laura Clarke, Tony Cox, James A. Cuff, Val Curwen, Thomas A. Down, Richard Durbin, Eduardo Eyras, James G. R. Gilbert, Martin Hammond, Tim J. P. Hubbard, Arek Kasprzyk, Damian Keefe, Heikki Lehväslaiho, Vivek Iyer, Craig Melsopp, Emmanuel Mongin, Roger Pettett, Simon C. Potter, Alistair G. Rust, Esther Schmidt, Stephen M. J. Searle, Guy Slater, James A. Smith, William Spooner, Arne Stabenau, Jim Stalker, Elia Stupka, Abel Ureta-Vidal, Imre Vastrik, Ewan Birney
Ensembl 2002: accommodating comparative genomics. Nucleic Acids Res. 31 (1) (2003)
Tim J. P. Hubbard, Daniel Barker, Ewan Birney, Graham Cameron, Yuan Chen, Laura Clarke, Tony Cox, James A. Cuff, Val Curwen, Thomas A. Down, Richard Durbin, Eduardo Eyras, James G. R. Gilbert, Martin Hammond, Lukasz Huminiecki, Arek Kasprzyk, Heikki Lehväslaiho, Philip Lijnzaad, Craig Melsopp, Emmanuel Mongin, Roger Pettett, Matthew R. Pocock, Simon C. Potter, Alistair G. Rust, Esther Schmidt, Stephen M. J. Searle, Guy Slater, James A. Smith, William Spooner, Arne Stabenau, Jim Stalker, Elia Stupka, Abel Ureta-Vidal, Imre Vastrik, Michele E. Clamp
The Ensembl genome database project. Nucleic Acids Res. 30 (1) (2002)
Maria J. Schilstra, Alistair G. Rust, Rod Adams, Hamid Bolouri
A finite state automaton model for multi-neuron simulations. Neurocomputing (2002)
Alistair G. Rust, Rod Adams, Stella J. George, Hamid Bolouri
Towards Computational Neural Systems through Developmental Evolution. Emergent Neural Computational Architectures Based on Neuroscience (2001)
Zhengjun Pan, Alistair G. Rust, Hamid Bolouri
Image Redundancy Reduction for Neural Network Classification Using Discrete Cosine Transforms. IJCNN (3) (2000)
Hamid Bolouri, Rod Adams, Stella J. George, Alistair G. Rust
Molecular Self-Organization in the Development Model for the Evolution of Large-scale Artificial Neural Networks. ICONIP (1998)
Alistair G. Rust, Rod Adams, Stella J. George, Hamid Bolouri
Designing Development Rules for Artificial Evolution. ICANNGA (1997)