Abbas Khan

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 48

Top Topics

Transcription Factors

Image Segmentation

Top Venues

Comput. Biol. Medicine

Database J. Biol. Databases Curation

Publications

Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh
Crop and Couple: cardiac image segmentation using interlinked specialist networks. CoRR (2024)
Omnia Alwazzan, Abbas Khan, Ioannis Patras, Gregory G. Slabaugh
MOAB: Multi-Modal Outer Arithmetic Block For Fusion Of Histopathological Images And Genetic Data For Brain Tumor Grading. CoRR (2024)
Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh
Convolution and Attention-Free Mamba-based Cardiac Image Segmentation. CoRR (2024)
Abbas Khan, Mustaqeem Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Giulia De Masi, Fakhri Karray
CamoFocus: Enhancing Camouflage Object Detection with Split-Feature Focal Modulation and Context Refinement. WACV (2024)
Muhammad Shahab, Muhammad Waleed Iqbal, Abbas Ahmad, Fahad M. Alshabrmi, Dong-Qing Wei, Abbas Khan, Guojun Zheng
Immunoinformatics-driven In silico vaccine design for Nipah virus (NPV): Integrating machine learning and computational epitope prediction. Comput. Biol. Medicine 170 (2024)
Mustaqeem, Muhammad Saad, Abbas Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Giulia De Masi, Fakhri Karray
Action Knowledge Graph for Violence Detection Using Audiovisual Features. ICCE (2024)
Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh
Multi-view Cardiac Image Segmentation via Trans-Dimensional Priors. CoRR (2024)
Abbas Khan, Mustaqeem Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Guilia De Masi, Fakhri Karray
SpotCrack: Leveraging a Lightweight Framework for Crack Segmentation in Infrastructure. ICCE (2024)
Yifan Jin, Addeela Fayyaz, Ayesha Liaqat, Abbas Khan, Abdulrahman Alshammari, Yanjing Wang, Ruo-Xu Gu, Dong-Qing Wei
Proteomics-based vaccine targets annotation and design of subunit and mRNA-based vaccines for Monkeypox virus (MPXV) against the recent outbreak. Comput. Biol. Medicine 159 (2023)
Muhammad Saeed, Abbas Khan, Mustaqeem Khan, Muhammad Saad, Abdulmotaleb El-Saddik, Wail Gueaieb
Gaming-Based Education System for Children on Road Safety in Metaverse Towards Smart Cities. ISC2 (2023)
Omnia Alwazzan, Abbas Khan, Ioannis Patras, Gregory G. Slabaugh
MOAB: Multi-Modal Outer Arithmetic Block for Fusion of Histopathological Images and Genetic Data for Brain Tumor Grading. ISBI (2023)
Amaya Gallagher-Syed, Abbas Khan, Felice Rivellese, Costantino Pitzalis, Myles J. Lewis, Gregory G. Slabaugh, Michael R. Barnes
Automated segmentation of rheumatoid arthritis immunohistochemistry stained synovial tissue. CoRR (2023)
Abbas Khan, Mustaqeem Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Guilia De Masi, Fakhri Karray
RECOD: Resource-Efficient Camouflaged Object Detection for UAV-Based Smart Cities Applications. ISC2 (2023)
Abbas Khan, Shoaib Adil, Hafiza Ayesha Qudsia, Yasir Waheed, Fahad M. Alshabrmi, Dong-Qing Wei
Structure-based design of promising natural products to inhibit thymidylate kinase from Monkeypox virus and validation using free energy calculations. Comput. Biol. Medicine 158 (2023)
Asma Sindhoo Nangraj, Saima Sipy, Abbas Khan, Gurudeeban Selvaraj, Abdulrahman Alshammari, Mark E. Casida, Dong-Qing Wei
ESOMIR: a curated database of biomarker genes and miRNAs associated with esophageal cancer. Database J. Biol. Databases Curation 2023 (2023)
Abbas Khan, Muhammad Asad, Alexander M. Zolotarev, Caroline H. Roney, Anthony Mathur, Martin Benning, Gregory G. Slabaugh
Misclassification Loss for Segmentation of the Aortic Vessel Tree. SEG.A@MICCAI (2023)
Wenfeng Li, Farah Bano, Abbas Khan, Dong-Qing Wei, Abdulrahman Alshammari, Bin Xu, Yanjing Wang
Inhibition of cMYC-MAX transcription factors hetero-dimerization with structurally engineered omoMYC to downregulate oncogenic pathways in renal carcinoma. Comput. Biol. Medicine 164 (2023)
Athar Shafiq, Farrukh Zubair, Amna Ambreen, Muhammad Suleman, Qudsia Yousafi, Zahid Rasul Niazi, Zeeshan Anwar, Abbas Khan, Anwar Mohammad, Dong-Qing Wei
Investigation of the binding and dynamic features of A.30 variant revealed higher binding of RBD for hACE2 and escapes the neutralizing antibody: A molecular simulation approach. Comput. Biol. Medicine 146 (2022)
Abbas Khan, Wasim Jamshed, Mohamed R. Eid, Amjad Ali Pasha, El Sayed M. Tag El Din, Hamiden Abd El-Wahed Khalifa, Samaher Khalaf Alharbi
Unsteady Electro-Hydrodynamic Stagnating Point Flow of Hybridized Nanofluid via a Convectively Heated Enlarging (Dwindling) Surface with Velocity Slippage and Heat Generation. Symmetry 14 (10) (2022)
Taimoor Khan, Muhammad Suleman, Syed Shujait Ali, Muhammad Farhan Sarwar, Imtiaz Ali, Liaqat Ali, Abbas Khan, Bakht Rokhan, Yanjing Wang, Ruili Zhao, Dong-Qing Wei
for immune response induction. Comput. Biol. Medicine 145 (2022)
Abbas Khan, Liliana Janik, Hatice Gunes
Computational Recognition of Facial Expressions in Sculpture. ACIIW (2022)
Abbas Khan, Wenfeng Li, Amna Ambreen, Dong-Qing Wei, Yanjing Wang, Yuanshen Mao
A protein coupling and molecular simulation analysis of the clinical mutants of androgen receptor revealed a higher binding for Leupaxin, to increase the prostate cancer invasion and motility. Comput. Biol. Medicine 146 (2022)
Imtiaz Ali, Abbas Khan, Zhang Fa, Taimoor Khan, Dong-Qing Wei, Jianting Zheng
and biophysical investigations. Comput. Biol. Medicine 145 (2022)
Talha Ilyas, Zubaer Ibna Mannan, Abbas Khan, Sami Azam, Hyongsuk Kim, Friso De Boer
TSFD-Net: Tissue specific feature distillation network for nuclei segmentation and classification. Neural Networks 151 (2022)
Abdullah Shah, Saira Rehmat, Iqra Aslam, Muhmmad Suleman, Farah Batool, Abdul Aziz, Farooq Rashid, Midrarullah, Muhmmad Asif Nawaz, Syed Shujait Ali, Muhammad Junaid, Abbas Khan, Dong-Qing Wei
Comparative mutational analysis of SARS-CoV-2 isolates from Pakistan and structural-functional implications using computational modelling and simulation approaches. Comput. Biol. Medicine 141 (2022)
Muhammad Suleman, Uzair Asad, Shafia Arshad, Ayaz ur Rahman, Fazal Akbar, Haji Khan, Zahid Hussain, Syed Shujait Ali, Anwar Mohammad, Abbas Khan, Liaqat Ali, Dong-Qing Wei
Screening of immune epitope in the proteome of the Dabie bandavirus, SFTS, to design a protein-specific and proteome-wide vaccine for immune response instigation using an immunoinformatics approaches. Comput. Biol. Medicine 148 (2022)
Fahad Humayun, Abbas Khan, Sajjad Ahmad, Wang Yuchen, Guoshen Wei, N. Nizam-Uddin, Zahid Hussain, Wajid Khan, Nasib Zaman, Muhammad Rizwan, Muhammad Waseem, Dong-Qing Wei
Abrogation of SARS-CoV-2 interaction with host (NRP1) neuropilin-1 receptor through high-affinity marine natural compounds to curtail the infectivity: A structural-dynamics data. Comput. Biol. Medicine 141 (2022)
Abbas Khan, Ijaz Ul Haq, Tanveer Hussain, Khan Muhammad, Mohammad Hijji, Muhammad Sajjad, Victor Hugo C. de Albuquerque, Sung Wook Baik
PMAL: A Proxy Model Active Learning Approach for Vision Based Industrial Applications. ACM Trans. Multim. Comput. Commun. Appl. 18 (2s) (2022)
Ismail Shah, Sehrooz Jamil, Saira Rehmat, Hammad Ahmad Butt, Syed Shujait Ali, Muhammad Idrees, Yifei Zhan, Zahid Hussain, Shahid Ali, Muhammad Waseem, Arshad Iqbal, Sajjad Ahmad, Abbas Khan, Yanjing Wang, Dong-Qing Wei
for immune response instigation. Comput. Biol. Medicine 143 (2022)
Abbas Khan, Omnia Alwazzan, Martin Benning, Greg G. Slabaugh
Sequential Segmentation of the Left Atrium and Atrial Scars Using a Multi-scale Weight Sharing Network and Boundary-Based Processing. LAScarQS@MICCAI (2022)
Fahad Humayun, Yutong Cai, Abbas Khan, Syed Ali Farhan, Fatima Khan, Usman Ishrat Rana, Anum binte Qamar, Nasim Fawad, Shazia Shamas, Dongqing-Wei
Structure-guided design of multi-epitopes vaccine against variants of concern (VOCs) of SARS-CoV-2 and validation through In silico cloning and immune simulations. Comput. Biol. Medicine 140 (2022)
Abbas Khan, Sarfaraz Hussain, Sajjad Ahmad, Muhammad Suleman, Imrana Bukhari, Taimoor Khan, Farooq Rashid, Abul Kalam Azad, Muhammad Waseem, Wajid Khan, Zahid Hussain, Asghar Khan, Syed Shujait Ali, Qiyao Qin, Dong-Qing Wei
Computational modelling of potentially emerging SARS-CoV-2 spike protein RBDs mutations with higher binding affinity towards ACE2: A structural modelling study. Comput. Biol. Medicine 141 (2022)
Saba Ismail, Farah Shahid, Abbas Khan, Sadia Bhatti, Sajjad Ahmad, Anam Naz, Ahmad Almatroudi, Muhammad Tahir Ul Qamar
Pan-vaccinomics approach towards a universal vaccine candidate against WHO priority pathogens to address growing global antibiotic resistance. Comput. Biol. Medicine 136 (2021)
Muhammad Tahir Ul Qamar, Sajjad Ahmad, Israr Fatima, Faisal Ahmad, Farah Shahid, Anam Naz, Sumra Wajid Abbasi, Abbas Khan, Muhammad Usman Mirza, Usman Ali Ashfaq, Ling-Ling Chen
by employing subtractive proteomics, reverse vaccinology and immuno-informatics approaches. Comput. Biol. Medicine 132 (2021)
Taimoor Khan, Abbas Khan, Syed Nouman Nasir, Sajjad Ahmad, Syed Shujait Ali, Dong-Qing Wei
CytomegaloVirusDb: Multi-omics knowledge database for cytomegaloviruses. Comput. Biol. Medicine 135 (2021)
Muhammad Suleman, Qudsia Yousafi, Javaid Ali, Syed Shujait Ali, Zahid Hussain, Shahid Ali, Muhammad Waseem, Arshad Iqbal, Sajjad Ahmad, Abbas Khan, Yanjing Wang, Dong-Qing Wei
Bioinformatics analysis of the differences in the binding profile of the wild-type and mutants of the SARS-CoV-2 spike protein variants with the ACE2 receptor. Comput. Biol. Medicine 138 (2021)
Nagina Inayat, Mukhtaj Khan, Nadeem Iqbal, Salman Khan, Mushtaq Raza, Dost Muhammad Khan, Abbas Khan, Dong-Qing Wei
iEnhancer-DHF: Identification of Enhancers and Their Strengths Using Optimize Deep Neural Network With Multiple Features Extraction Methods. IEEE Access 9 (2021)
Talha Ilyas, Abbas Khan, Muhammad Umraiz, Yongchae Jeong, Hyongsuk Kim
Multi-Scale Context Aggregation for Strawberry Fruit Recognition and Disease Phenotyping. IEEE Access 9 (2021)
Taimoor Khan, Abbas Khan, Dong-Qing Wei
MMV-db: vaccinomics and RNA-based therapeutics database for infectious hemorrhagic fever-causing mammarenaviruses. Database J. Biol. Databases Curation 2021 (2021)
Abbas Khan, Shahzeb Khan, Shoaib Saleem, N. Nizam-Uddin, Anwar Mohammad, Taimoor Khan, Sajjad Ahmad, Muhammad Arshad, Syed Shujait Ali, Muhammad Suleman, Dong-Qing Wei
cloning and immune simulation. Comput. Biol. Medicine 133 (2021)
Adnan Zeb, Syed Shujait Ali, Abul Kalam Azad, Muhammad Safdar, Zeeshan Anwar, Muhammad Suleman, N. Nizam-Uddin, Abbas Khan, Dong-Qing Wei
. Comput. Biol. Medicine 133 (2021)
Abbas Khan, Taimoor Khan, Syed Nouman Nasir, Syed Shujait Ali, Muhammad Suleman, Muhammad Rizwan, Muhammad Waseem, Shahid Ali, Xia Zhao, Dong-Qing Wei
BC-TFdb: a database of transcription factor drivers in breast cancer. Database J. Biol. Databases Curation 2021 (2021)
Muhammad Tahir Ul Qamar, Sajjad Ahmad, Abbas Khan, Muhammad Usman Mirza, Sarfraz Ahmad, Asma Abro, Ling-Ling Chen, Ahmad Almatroudi, Dong-Qing Wei
through integrated computational approaches. Comput. Biol. Medicine 138 (2021)
Abbas Khan, Muhammad Ilyas, Georgi Gaydadjiev
Deep Multi-Patch Aggregation Network for Kinship Recognition. ICFSP (2021)
Abbas Khan, Hyongsuk Kim, Leon O. Chua
PMED-Net: Pyramid Based Multi-Scale Encoder-Decoder Network for Medical Image Segmentation. IEEE Access 9 (2021)
Nazia Azim, Nadeem Iqbal, Jamil Ahmad, Mukhtaj Khan, Amnah Siddiqa, Javaria Ashraf, Abbas Khan, Dong-Qing Wei
Biological Regulatory Networks for ARVC Using Automata Network Model. IEEE Access 9 (2021)
Gurudeeban Selvaraj, Satyavani Kaliamurthi, Aman Chandra Kaushik, Abbas Khan, Yong-Kai Wei, William C. S. Cho, Keren Gu, Dong-Qing Wei
Identification of target gene and prognostic evaluation for lung adenocarcinoma using gene expression meta-analysis, network analysis and neural network algorithms. J. Biomed. Informatics 86 (2018)
Abbas Khan, Arif Ali, Muhammad Junaid, Chang Liu, Aman Chandra Kaushik, William C. S. Cho, Dong-Qing Wei
Identification of novel drug targets for diamond-blackfan anemia based on RPS19 gene mutation using protein-protein interaction network. BMC Syst. Biol. 12 (4) (2018)