Binding site extraction by similar subgraphs mining from protein molecular surfaces.
Natsumi KurumataniHiroyuki MonjiTakenao OhkawaPublished in: BIBE (2012)
Keyphrases
- virtual screening
- protein protein
- binding sites
- drug discovery
- protein protein interactions
- similarity searching
- high throughput
- computational methods
- protein sequences
- interaction networks
- drug design
- sequence data
- regulatory elements
- protein function
- dna sequences
- sequence alignment
- information extraction
- predicting protein
- protein structure
- automatic extraction
- gene expression
- dna binding
- molecular structures
- sequential patterns
- protein structure prediction
- microarray
- text mining
- molecular dynamics
- data mining
- itemsets
- similarity search
- sequence analysis
- graph data
- biological networks
- early stage