Assembling Genes from Predicted Exons In Linear Time with Dynamic Programming.
Roderic GuigóPublished in: J. Comput. Biol. (1998)
Keyphrases
- dynamic programming
- alternative splicing
- gene expression
- microarray data
- sequence data
- rna seq
- gene expression data
- state space
- worst case
- linear programming
- splice site
- stereo matching
- microarray gene expression data
- differentially expressed genes
- gene regulatory networks
- human genome
- escherichia coli
- coarse to fine
- microarray data analysis
- lagrangian relaxation
- gene selection
- gene expression profiles
- biological processes
- gene ontology
- single machine
- markov decision processes
- microarray
- sequence alignment
- reinforcement learning
- greedy algorithm
- optimal policy
- high dimensional