PALLAS: Penalized mAximum LikeLihood and pArticle Swarms for Inference of Gene Regulatory Networks From Time Series Data.
Yukun TanFernando B. Lima NetoUlisses M. Braga-NetoPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2022)
Keyphrases
- maximum likelihood
- gene regulatory networks
- genetic regulatory networks
- dynamic bayesian networks
- bayesian inference
- reverse engineering
- gene regulatory
- gene expression data
- network model
- parameter estimation
- boolean networks
- regulatory networks
- biological data
- structure learning
- maximum a posteriori
- hyperparameters
- em algorithm
- expectation maximization
- markov networks
- maximum likelihood estimation
- approximate inference
- probabilistic inference
- bayesian networks
- particle filtering
- prior information
- software engineering
- high dimensional
- data sets
- microarray data
- logic programs
- object oriented
- artificial intelligence
- machine learning
- neural network