MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences.
Yonggan WuBo WeiHaizhou LiuTianxian LiSimon RaynerPublished in: BMC Bioinform. (2011)
Keyphrases
- coding regions
- binding sites
- sequence similarity
- genome scale
- secondary structure
- rna sequences
- dna sequences
- computational methods
- protein structure prediction
- human genome
- protein interaction
- biological sequences
- sequence alignment
- gene expression
- probability distribution
- high throughput
- protein sequences
- transcription factors
- pairwise
- systems biology
- metabolic pathways
- transcription factor binding sites
- sequential patterns
- co occurrence