DNA assembly with de bruijn graphs on FPGA.
Carl PoirierBenoit GosselinPaul FortierPublished in: EMBC (2015)
Keyphrases
- graph structure
- motif discovery
- dna computing
- dna sequences
- real time image processing
- high speed
- hardware design
- directed graph
- real time
- hardware implementation
- signal processing
- single chip
- graph theoretic
- graph databases
- graph theory
- fpga implementation
- graph representation
- hardware architecture
- random graphs
- biological sequences
- verilog hdl
- graph clustering
- graph model
- bipartite graph
- graph matching
- data acquisition
- low cost