Aligning and Clustering Patterns to Reveal the Protein Functionality of Sequences.
Andrew K. C. WongEn-Shiun Annie LeePublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2014)
Keyphrases
- sequence databases
- sequence alignment
- k means
- clustering algorithm
- clustering method
- complex patterns
- temporal patterns
- sequence analysis
- transcription factor binding sites
- sequential patterns
- similar patterns
- multiple sequence alignment
- nucleotide sequences
- multiple data streams
- self organizing maps
- sequence patterns
- sequence data
- sequential data
- pattern discovery
- protein sequences
- physico chemical
- pattern extraction
- chemical compounds
- hidden markov models
- data points
- frequent patterns
- amino acids
- similarity search
- high dimensional data
- data mining techniques
- pattern mining
- image registration
- sequence similarity
- document clustering
- subcellular localization
- protein structure
- hierarchical clustering