Discovering Gene-Disease Associations with Biomedical Word Embeddings.
Payal MitraThom PijnenburgViachaslau SazonauPublished in: ICMLA (2020)
Keyphrases
- biological entities
- biological knowledge
- biomedical literature
- gene gene
- microarray
- genetic variation
- high throughput
- text mining
- disease genes
- protein protein interactions
- gene expression data
- gene networks
- biological systems
- gene regulatory networks
- gene function
- gene expression
- automatic extraction
- candidate genes
- n gram
- co occurrence
- related genes
- molecular level
- manifold learning
- dna microarray
- keywords
- microarray data
- word sense disambiguation
- sequence data
- vector space
- biological processes
- human genome
- escherichia coli
- word pairs
- genome wide
- data sets
- gene gene interactions
- data points
- euclidean space