SALSA: A Domain Specific Architecture for Sequence Alignment.

Lorenzo Di Tucci Riyadh Baghdadi Saman P. Amarasinghe Marco D. Santambrogio

Published in: IPDPS Workshops (2020)

Keyphrases

sequence alignment
domain specific
pairwise
general purpose
domain independent
real time
management system
protein sequences
phylogenetic analysis
gpu accelerated
amino acids
ranking algorithm
binding sites
dynamic programming
multi dimensional
multiple alignment
association rules