Effects of protein conformation in docking: improved pose prediction through protein pocket adaptation.
Ajay N. JainPublished in: J. Comput. Aided Mol. Des. (2009)
Keyphrases
- protein structure prediction
- protein structure
- contact map
- subcellular localization
- protein folding
- amino acids
- dead end
- amino acid sequences
- protein tertiary structure
- contact maps
- protein sequences
- protein homology
- experimentally determined
- drug design
- protein secondary structure
- computational biology
- sequence analysis
- remote homology detection
- prediction accuracy
- molecular dynamics
- molecular biology
- secondary structure
- protein protein interactions
- pose estimation
- neural network
- protein classification
- protein function
- protein interaction
- physico chemical
- graph theory
- protein chains
- molecular structures
- protein secondary structure prediction
- predicting protein
- mass spectrometry
- multiple sequence alignments
- mass spectra
- protein function prediction
- sequence alignment
- prediction model
- fine grained
- search algorithm
- computer vision