Tuning Approximate Boyer-Moore for Gene Sequences.
Petri KalsiLeena SalmelaJorma TarhioPublished in: SPIRE (2007)
Keyphrases
- boyer moore
- pattern matching
- sequence alignment
- genomic sequences
- hidden markov models
- sliding window
- search algorithm
- gene expression
- frequent patterns
- parameter settings
- gene expression profiles
- sequential patterns
- gene selection
- neural network
- database systems
- long sequences
- transcription factor binding sites
- nucleotide sequences
- microarray expression data
- genetic algorithm