Differential enrichment of regulatory motifs in the composite network of protein-protein and gene regulatory interactions.
Shubhada R. HegdeKhushbu PalShekhar C. MandePublished in: BMC Syst. Biol. (2014)
Keyphrases
- gene regulatory
- interaction networks
- gene regulatory networks
- protein protein
- systems biology
- transcription factors
- binding sites
- regulatory networks
- network model
- biological networks
- gene regulation
- gene expression data
- transcription factor binding sites
- reverse engineering
- protein protein interactions
- biological processes
- high throughput
- biological data
- protein interaction
- functional modules
- sequence data
- biological knowledge
- gene expression
- protein interaction networks
- gene ontology
- molecular biology
- software engineering
- biological systems
- bayesian inference
- microarray
- computational methods
- motif discovery
- dna sequences
- data analysis
- dynamic bayesian networks
- high dimensional
- high precision
- complex networks
- protein protein interaction networks
- protein complexes
- network topology
- computational biology
- biomedical literature
- statistical significance
- feature selection