A segmentation protocol and MRI atlas of the C57BL/6J mouse neocortex.
Jeremy F. P. UllmannCharles WatsonAndrew L. JankeNyoman D. KurniawanDavid C. ReutensPublished in: NeuroImage (2013)
Keyphrases
- brain structures
- mouse brain
- mr images
- magnetic resonance images
- atlas based segmentation
- brain atlas
- brain scans
- probabilistic atlas
- medical image analysis
- medical images
- medical imaging
- intra subject
- human brain
- quantitative analysis
- brain mri
- shape analysis
- accurate segmentation
- manual segmentation
- magnetic resonance
- magnetic resonance imaging
- anatomical structures
- tissue segmentation
- automatic segmentation
- brain tissue
- mri images
- image segmentation
- segmentation algorithm
- brain mr images
- brain tumors
- carotid artery
- segmentation accuracy
- bias field
- mri data
- image data
- shape variations
- level set
- label fusion
- brain segmentation
- healthy volunteers
- subcortical structures
- brain anatomy
- dice similarity coefficient
- phase contrast
- white matter
- deformable models
- segmentation method
- high resolution