transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation.
Timothy R. FallonTereza CalounováMartin MokrejsJing-Ke WengTomás PluskalPublished in: BMC Bioinform. (2023)
Keyphrases
- rna seq
- high throughput
- semantic annotation
- metadata
- human genome
- image annotation
- multi modal
- automatic image annotation
- automatic annotation
- active learning
- pipeline architecture
- tandem mass spectra
- gene expression
- automatic indexing
- genomic sequences
- alternative splicing
- processing pipeline
- annotation tool
- neural network
- assembly line
- rna sequences