PARC: A Processing-in-CAM Architecture for Genomic Long Read Pairwise Alignment using ReRAM.
Fan ChenLinghao SongHai Helen LiYiran ChenPublished in: ASP-DAC (2020)
Keyphrases
- pairwise
- real time
- distributed processing
- multi class
- parallel architecture
- sequence alignment
- data processing
- software architecture
- global alignment
- hardware implementation
- content addressable memory
- proteomic data
- computation intensive
- processing elements
- sequence data
- high throughput
- belief propagation
- pairwise interactions
- markov random field
- management system
- network architecture
- similarity function
- data acquisition
- similarity measure