Nucleotide composition string selection in HIV-1 subtyping using whole genomes.
Xiaomeng WuZhipeng CaiXiu-Feng WanTin HoangRandy GoebelGuohui LinPublished in: Bioinform. (2007)
Keyphrases
- protein coding regions
- genome sequences
- pattern matching
- machine learning
- comparative analysis
- string matching
- selection strategy
- sequence data
- edit distance
- selection algorithm
- databases
- regular expressions
- database
- context free grammars
- sequence alignment
- dna sequences
- sequence analysis
- genomic sequences
- data structure