Gene-pair representation and incorporation of GO-based semantic similarity into classification of gene expression data.
Torsten SchönAlexey TsymbalMartin HuberPublished in: Intell. Data Anal. (2012)
Keyphrases
- gene expression data
- semantic similarity
- microarray
- gene expression
- dna microarray data
- cancer classification
- gene expression analysis
- gene expression profiles
- gene ontology
- high dimensionality
- dna microarray
- gene expression datasets
- colon cancer
- feature selection
- microarray datasets
- cancer diagnosis
- microarray data
- gene regulatory networks
- gene expression patterns
- gene selection
- gene networks
- analysis of gene expression data
- informative genes
- pattern recognition
- gene expression data sets
- co occurrence
- data sets
- microarray gene expression data
- regulatory networks
- high dimensional data
- image classification
- wordnet
- similarity measure
- machine learning
- molecular biology
- high dimensional
- decision trees
- tissue samples
- search engine
- information retrieval
- data analysis
- training set
- data mining
- natural language processing