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An Algorithm and Applications to Sequence Alignment with Weighted Constraints.
Yung-Hsing Peng
Chang-Biau Yang
Kuo-Tsung Tseng
Kuo-Si Huang
Published in:
Int. J. Found. Comput. Sci. (2010)
Keyphrases
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sequence alignment
np hard
learning algorithm
detection algorithm
optimal solution
worst case
similarity measure
k means
constrained optimization
gpu accelerated
genetic algorithm
computational complexity
search space
dynamic programming
tree structure
geometric constraints