Measuring Cluster Stability in a Large Scale Phylogenetic Analysis of Functional Genes in Metagenomes Using pplacer.
Tyler A. LandPerry FizzanoRobin B. KodnerPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2016)
Keyphrases
- phylogenetic analysis
- gene clusters
- functional properties
- gene expression
- genomic sequences
- gene function
- gene expression data
- microarray data
- sequence alignment
- molecular biology
- clustering algorithm
- related genes
- experimental conditions
- gene selection
- microarray
- data mining
- gene products
- gene ontology terms
- computational approaches
- microarray datasets
- gene regulatory networks
- biomedical literature
- gene ontology
- genome wide
- biological data
- cluster analysis
- data points
- pairwise
- data analysis
- feature selection
- information retrieval