DNA Familial Binding Profiles Made Easy: Comparison of Various Motif Alignment and Clustering Strategies.
Shaun MahonyPhilip E. AuronPanayiotis V. BenosPublished in: PLoS Comput. Biol. (2007)
Keyphrases
- dna sequences
- clustering algorithm
- binding sites
- clustering method
- transcription factor binding sites
- k means
- motif discovery
- sequence alignment
- data points
- graph theoretic
- information theoretic
- cluster analysis
- biological sequences
- sequence analysis
- document clustering
- unsupervised learning
- multiple sequence alignment
- dna computing
- neural network
- cis regulatory
- transcription factors
- data mining tasks
- dynamic time warping
- fuzzy clustering
- self organizing maps
- user profiles
- data mining