Fast string matching for DNA sequences.
Cheol RyuThierry LecroqKunsoo ParkPublished in: Theor. Comput. Sci. (2020)
Keyphrases
- string matching
- dna sequences
- pattern matching
- tandem repeats
- edit distance
- human genome
- suffix tree
- dna sequencing
- motif discovery
- approximate matching
- sequence patterns
- dna computing
- approximate string matching
- biological sequences
- gene structure prediction
- binding sites
- regular expressions
- suffix array
- databases
- relational databases
- coding regions
- machine learning
- data sets