SHINE: protein language model-based pathogenicity prediction for short inframe insertion and deletion variants.
Xiao FanHongbing PanAlan TianWendy K. ChungYufeng ShenPublished in: Briefings Bioinform. (2023)
Keyphrases
- subcellular localization
- contact map
- protein secondary structure
- prediction accuracy
- protein structure prediction
- programming language
- contact maps
- drug design
- natural language
- protein tertiary structure
- protein sequences
- protein homology
- protein structure
- protein secondary structure prediction
- predicting protein
- amino acids
- language learning
- prediction algorithm
- protein interaction
- insertions and deletions
- specification language
- remote homology detection
- amino acid sequences
- experimentally determined
- prediction error
- prediction model
- high throughput
- secondary structure