Protein localization prediction using random walks on graphs.
Xiao-hua XuLin LuPing HeLing ChenPublished in: BMC Bioinform. (2013)
Keyphrases
- random walk
- directed graph
- subcellular localization
- contact map
- protein structure prediction
- spectral methods
- average degree
- markov chain
- hyper graph
- web graph
- graph theory
- protein structure
- flow graph
- transition probabilities
- nodes of a graph
- transition probability matrix
- amino acids
- link prediction
- protein interaction networks
- protein interaction
- stationary distribution
- protein sequences
- adjacency matrix
- reinforcement learning
- graph databases
- graph mining
- dynamic programming