Reproducibility and Generalization of a Relation Extraction System for Gene-Disease Associations.
Laura MenottiPublished in: itaDATA (2023)
Keyphrases
- relation extraction
- biological entities
- gene gene
- automatic extraction
- manually annotated
- information extraction
- microarray
- biomedical literature
- genetic variation
- semantic relations
- named entities
- domain specific
- dependency trees
- semantic features
- question answering
- broad coverage
- semantic role labeling
- complex diseases
- named entity recognition
- high throughput
- tree kernels
- genome wide association studies
- natural language
- text mining
- named entity recognizer
- single nucleotide polymorphisms
- general purpose
- co occurrence