CORSID Enables de novo Identification of Transcription Regulatory Sequences and Genes in Coronaviruses.
Chuanyi ZhangPalash SashittalMohammed El-KebirPublished in: RECOMB (2022)
Keyphrases
- genomic sequences
- tandem mass spectrometry
- cis regulatory
- gene regulation
- regulatory elements
- binding sites
- genome sequences
- human genome
- dna sequences
- sequence data
- transcriptional regulation
- mass spectrometry
- gene expression
- transcription factors
- transcriptional regulatory
- transcription factor binding sites
- genome wide
- microarray data
- gene regulatory
- mass spectra
- coding regions
- gene expression data
- rna seq
- genetic regulatory networks
- biological sequences
- hidden markov models
- dna binding
- alternative splicing
- saccharomyces cerevisiae
- sequence alignment
- regulatory networks
- gene function
- differentially expressed
- gene prediction
- statistical significance
- rna sequences
- reverse engineering
- gene regulatory networks